Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   ID12_RS10300 Genome accession   NZ_CP009108
Coordinates   2055934..2056899 (+) Length   321 a.a.
NCBI ID   WP_008348509.1    Uniprot ID   A0A9X0FWP2
Organism   Bacillus altitudinis strain GR-8     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2050934..2061899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ID12_RS10270 (ID12_10660) argF 2051257..2052207 (+) 951 WP_017360177.1 ornithine carbamoyltransferase -
  ID12_RS10275 (ID12_10665) - 2052311..2052490 (+) 180 WP_008348517.1 YjzC family protein -
  ID12_RS10280 (ID12_10670) - 2052660..2053925 (+) 1266 WP_007499050.1 MFS transporter -
  ID12_RS10285 (ID12_10680) - 2054045..2054239 (-) 195 WP_008348514.1 YjzD family protein -
  ID12_RS10290 (ID12_10685) - 2054452..2055192 (+) 741 WP_007499048.1 hypothetical protein -
  ID12_RS10295 (ID12_10690) - 2055268..2055843 (+) 576 WP_017360175.1 hypothetical protein -
  ID12_RS10300 (ID12_10695) med 2055934..2056899 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  ID12_RS10305 (ID12_10700) comZ 2056911..2057108 (+) 198 WP_008348507.1 ComZ family protein Regulator
  ID12_RS10310 (ID12_10705) - 2057311..2057544 (-) 234 WP_017360173.1 hypothetical protein -
  ID12_RS10315 (ID12_10710) - 2057714..2058652 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  ID12_RS10320 (ID12_10715) fabF 2058674..2059915 (+) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  ID12_RS10325 (ID12_10720) - 2059993..2060787 (+) 795 WP_046527014.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35902.89 Da        Isoelectric Point: 5.9297

>NTDB_id=126861 ID12_RS10300 WP_008348509.1 2055934..2056899(+) (med) [Bacillus altitudinis strain GR-8]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKNDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=126861 ID12_RS10300 WP_008348509.1 2055934..2056899(+) (med) [Bacillus altitudinis strain GR-8]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAAACGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACAGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGTGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632

Multiple sequence alignment