Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | ID12_RS09885 | Genome accession | NZ_CP009108 |
| Coordinates | 1969435..1970013 (+) | Length | 192 a.a. |
| NCBI ID | WP_017366958.1 | Uniprot ID | A0A5D4P9G2 |
| Organism | Bacillus altitudinis strain GR-8 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1964435..1975013
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ID12_RS09865 (ID12_10255) | - | 1964928..1966289 (-) | 1362 | WP_419761247.1 | globin-coupled sensor protein | - |
| ID12_RS09870 (ID12_10260) | - | 1966315..1967847 (-) | 1533 | WP_050827113.1 | FAD-dependent oxidoreductase | - |
| ID12_RS09875 (ID12_10265) | - | 1967990..1968850 (+) | 861 | WP_050827114.1 | SDR family oxidoreductase | - |
| ID12_RS09880 (ID12_10270) | - | 1968909..1969145 (-) | 237 | WP_050827115.1 | IDEAL domain-containing protein | - |
| ID12_RS09885 (ID12_10275) | comK | 1969435..1970013 (+) | 579 | WP_017366958.1 | competence protein ComK | Regulator |
| ID12_RS09890 (ID12_10280) | - | 1970157..1971263 (+) | 1107 | WP_050827682.1 | D-TA family PLP-dependent enzyme | - |
| ID12_RS09895 (ID12_10285) | - | 1971565..1972047 (+) | 483 | WP_019743337.1 | hypothetical protein | - |
| ID12_RS09900 (ID12_10290) | - | 1972078..1973517 (-) | 1440 | WP_050827116.1 | PLP-dependent aminotransferase family protein | - |
| ID12_RS09905 (ID12_10295) | - | 1973661..1974830 (+) | 1170 | WP_050827117.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22348.40 Da Isoelectric Point: 8.7996
>NTDB_id=126857 ID12_RS09885 WP_017366958.1 1969435..1970013(+) (comK) [Bacillus altitudinis strain GR-8]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=126857 ID12_RS09885 WP_017366958.1 1969435..1970013(+) (comK) [Bacillus altitudinis strain GR-8]
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATACGAAGTAACAGGAATTTCCCACAAGCCACCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTTCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATACGAAGTAACAGGAATTTCCCACAAGCCACCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTTCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.458 |
100 |
0.615 |