Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ID12_RS08915 Genome accession   NZ_CP009108
Coordinates   1786744..1787535 (+) Length   263 a.a.
NCBI ID   WP_017358838.1    Uniprot ID   A0A5K1NDE0
Organism   Bacillus altitudinis strain GR-8     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1781744..1792535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ID12_RS08885 (ID12_09200) - 1781833..1782381 (+) 549 WP_008341670.1 thioredoxin family protein -
  ID12_RS08890 (ID12_09205) - 1782720..1783187 (+) 468 WP_007496690.1 thiol-disulfide oxidoreductase DCC family protein -
  ID12_RS08895 (ID12_09210) - 1783223..1784479 (-) 1257 WP_035391280.1 transcriptional regulator -
  ID12_RS08900 (ID12_09215) - 1784750..1785337 (+) 588 WP_050827681.1 nitroreductase family protein -
  ID12_RS08905 (ID12_09220) - 1785372..1785527 (-) 156 WP_008341997.1 YfhD family protein -
  ID12_RS18875 - 1785589..1785699 (-) 111 WP_017358836.1 YfhE family protein -
  ID12_RS08910 (ID12_09230) - 1785752..1786648 (-) 897 WP_048002110.1 TIGR01777 family oxidoreductase -
  ID12_RS08915 (ID12_09235) recX 1786744..1787535 (+) 792 WP_017358838.1 recombination regulator RecX Regulator
  ID12_RS08920 (ID12_09240) - 1787539..1787853 (+) 315 WP_007496702.1 YfhH family protein -
  ID12_RS18880 - 1787916..1788089 (-) 174 WP_003217811.1 YpzG family protein -
  ID12_RS08925 (ID12_09250) - 1788115..1788264 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  ID12_RS08930 (ID12_09255) - 1788381..1788653 (+) 273 WP_017358840.1 YfhJ family protein -
  ID12_RS08935 (ID12_09260) - 1788955..1789938 (+) 984 WP_008341983.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30630.03 Da        Isoelectric Point: 7.0789

>NTDB_id=126853 ID12_RS08915 WP_017358838.1 1786744..1787535(+) (recX) [Bacillus altitudinis strain GR-8]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=126853 ID12_RS08915 WP_017358838.1 1786744..1787535(+) (recX) [Bacillus altitudinis strain GR-8]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCATATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AATTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTGAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGCTTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NDE0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635

Multiple sequence alignment