Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | WV34_RS14705 | Genome accession | NZ_CP011252 |
| Coordinates | 2895622..2896752 (-) | Length | 376 a.a. |
| NCBI ID | WP_013353308.1 | Uniprot ID | A0A9P1JJI8 |
| Organism | Bacillus amyloliquefaciens strain MT45 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2890622..2901752
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WV34_RS14675 (WV34_14315) | - | 2890842..2891510 (+) | 669 | WP_088613325.1 | TrkA family potassium uptake protein | - |
| WV34_RS14680 (WV34_14320) | - | 2891535..2892380 (-) | 846 | WP_088613326.1 | glucosaminidase domain-containing protein | - |
| WV34_RS14685 (WV34_14325) | hmpA | 2892520..2893695 (-) | 1176 | WP_088613327.1 | NO-inducible flavohemoprotein | - |
| WV34_RS14690 (WV34_14330) | - | 2893910..2894551 (+) | 642 | WP_088613328.1 | cupin domain-containing protein | - |
| WV34_RS14695 (WV34_14335) | - | 2894612..2894932 (-) | 321 | WP_088613329.1 | hypothetical protein | - |
| WV34_RS20470 | - | 2895504..2895632 (-) | 129 | WP_256386994.1 | hypothetical protein | - |
| WV34_RS14705 (WV34_14345) | rapC | 2895622..2896752 (-) | 1131 | WP_013353308.1 | tetratricopeptide repeat protein | Regulator |
| WV34_RS14710 (WV34_14350) | - | 2897140..2897343 (+) | 204 | WP_014470862.1 | hypothetical protein | - |
| WV34_RS14720 (WV34_14360) | - | 2897662..2898492 (-) | 831 | WP_038463014.1 | undecaprenyl-diphosphate phosphatase | - |
| WV34_RS14725 (WV34_14365) | - | 2898584..2899744 (-) | 1161 | WP_013353344.1 | AI-2E family transporter | - |
| WV34_RS14730 (WV34_14370) | - | 2899923..2900909 (+) | 987 | WP_013353345.1 | Gfo/Idh/MocA family oxidoreductase | - |
| WV34_RS14735 (WV34_14375) | - | 2900941..2901465 (-) | 525 | WP_088613331.1 | type 1 glutamine amidotransferase domain-containing protein | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 44372.86 Da Isoelectric Point: 6.5099
>NTDB_id=126841 WV34_RS14705 WP_013353308.1 2895622..2896752(-) (rapC) [Bacillus amyloliquefaciens strain MT45]
MSPVLPSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEINEMEEDEYLLIYYSLMKFRHQLMLDYLEPVTVRVRPTIDE
LLEKIEASNKGISGLLCYYSLFFRGMYEFDQKQYVKAIGFYREAEKQLIHVHDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYDQYELYKVRKIQCLFVISGNYVDFKRYEKSLPHLEKALELSKQVNNNERLLSSAYYNIGKNYGDLEEYSKAE
IYLKKAAEISEKYKLGNLPHSLFTYAKLLFKQGKTSEAIQISKKGLSSAIYQGDKLFESLQKYLEALYINAIDQMGIKKT
IDYLEKNKNYSYVEDIALDTAAVYAESKQYDKSYIYHQKMIQTQKQIQRGECLYEF
MSPVLPSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEINEMEEDEYLLIYYSLMKFRHQLMLDYLEPVTVRVRPTIDE
LLEKIEASNKGISGLLCYYSLFFRGMYEFDQKQYVKAIGFYREAEKQLIHVHDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYDQYELYKVRKIQCLFVISGNYVDFKRYEKSLPHLEKALELSKQVNNNERLLSSAYYNIGKNYGDLEEYSKAE
IYLKKAAEISEKYKLGNLPHSLFTYAKLLFKQGKTSEAIQISKKGLSSAIYQGDKLFESLQKYLEALYINAIDQMGIKKT
IDYLEKNKNYSYVEDIALDTAAVYAESKQYDKSYIYHQKMIQTQKQIQRGECLYEF
Nucleotide
Download Length: 1131 bp
>NTDB_id=126841 WV34_RS14705 WP_013353308.1 2895622..2896752(-) (rapC) [Bacillus amyloliquefaciens strain MT45]
GTGAGTCCTGTTTTACCATCATCGGAGGTTGGCGTTAAGATTAATGAATGGTACAAAATGATACGTCAGTTCAGTGTTCC
GGATGCGGAGATTTTGAAAGCGGAAGTGGAACAAGAGATAAACGAGATGGAAGAAGACGAGTATTTACTAATATATTATT
CTCTCATGAAATTCCGCCATCAACTCATGCTTGATTATTTAGAGCCGGTAACTGTCAGAGTCCGACCGACAATCGACGAG
TTGCTGGAAAAAATCGAAGCATCAAATAAAGGCATTTCCGGCCTGCTGTGCTATTATTCTTTATTTTTTCGCGGCATGTA
TGAATTTGATCAGAAGCAGTATGTAAAGGCGATCGGCTTTTATAGAGAGGCTGAAAAACAACTCATTCATGTGCATGATG
AAATTGAGAGAGCGGAGTTTCATTTTAAACTGGCTGAAGCATATTACGGTATGAAACAAAGCCACGTCTCCATGCATCAC
GTCAAACAAGCGCTGGATATTTACGATCAGTATGAGTTGTATAAGGTCCGGAAAATTCAATGTCTGTTCGTCATATCTGG
GAATTATGTTGACTTTAAACGTTATGAAAAAAGTTTGCCGCATTTAGAAAAAGCTTTAGAGCTGTCGAAACAAGTAAACA
ATAATGAAAGGCTGCTCAGTTCTGCTTATTACAACATAGGAAAGAATTACGGAGACTTAGAAGAATACAGTAAAGCTGAA
ATCTACTTAAAAAAAGCAGCGGAGATATCTGAAAAGTATAAATTGGGCAACCTTCCGCATTCCTTGTTTACATACGCAAA
GCTTCTATTTAAACAAGGGAAAACAAGCGAGGCGATTCAAATCAGCAAAAAAGGACTTTCATCAGCGATATATCAAGGGG
ATAAGCTGTTTGAATCTCTGCAAAAATATTTGGAGGCTTTATACATTAACGCAATAGACCAAATGGGAATCAAAAAAACA
ATTGATTACCTTGAGAAAAATAAAAACTATTCGTATGTAGAAGATATTGCTCTTGATACGGCTGCTGTTTATGCAGAGTC
AAAGCAATATGACAAATCATATATTTATCATCAAAAAATGATTCAAACGCAAAAACAAATTCAGAGGGGAGAATGCCTGT
ATGAATTTTAG
GTGAGTCCTGTTTTACCATCATCGGAGGTTGGCGTTAAGATTAATGAATGGTACAAAATGATACGTCAGTTCAGTGTTCC
GGATGCGGAGATTTTGAAAGCGGAAGTGGAACAAGAGATAAACGAGATGGAAGAAGACGAGTATTTACTAATATATTATT
CTCTCATGAAATTCCGCCATCAACTCATGCTTGATTATTTAGAGCCGGTAACTGTCAGAGTCCGACCGACAATCGACGAG
TTGCTGGAAAAAATCGAAGCATCAAATAAAGGCATTTCCGGCCTGCTGTGCTATTATTCTTTATTTTTTCGCGGCATGTA
TGAATTTGATCAGAAGCAGTATGTAAAGGCGATCGGCTTTTATAGAGAGGCTGAAAAACAACTCATTCATGTGCATGATG
AAATTGAGAGAGCGGAGTTTCATTTTAAACTGGCTGAAGCATATTACGGTATGAAACAAAGCCACGTCTCCATGCATCAC
GTCAAACAAGCGCTGGATATTTACGATCAGTATGAGTTGTATAAGGTCCGGAAAATTCAATGTCTGTTCGTCATATCTGG
GAATTATGTTGACTTTAAACGTTATGAAAAAAGTTTGCCGCATTTAGAAAAAGCTTTAGAGCTGTCGAAACAAGTAAACA
ATAATGAAAGGCTGCTCAGTTCTGCTTATTACAACATAGGAAAGAATTACGGAGACTTAGAAGAATACAGTAAAGCTGAA
ATCTACTTAAAAAAAGCAGCGGAGATATCTGAAAAGTATAAATTGGGCAACCTTCCGCATTCCTTGTTTACATACGCAAA
GCTTCTATTTAAACAAGGGAAAACAAGCGAGGCGATTCAAATCAGCAAAAAAGGACTTTCATCAGCGATATATCAAGGGG
ATAAGCTGTTTGAATCTCTGCAAAAATATTTGGAGGCTTTATACATTAACGCAATAGACCAAATGGGAATCAAAAAAACA
ATTGATTACCTTGAGAAAAATAAAAACTATTCGTATGTAGAAGATATTGCTCTTGATACGGCTGCTGTTTATGCAGAGTC
AAAGCAATATGACAAATCATATATTTATCATCAAAAAATGATTCAAACGCAAAAACAAATTCAGAGGGGAGAATGCCTGT
ATGAATTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
44.591 |
100 |
0.449 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
40.633 |
100 |
0.41 |