Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | WV34_RS08850 | Genome accession | NZ_CP011252 |
| Coordinates | 1718595..1718957 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain MT45 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1713595..1723957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WV34_RS08820 (WV34_08620) | flgD | 1714510..1714941 (+) | 432 | WP_071346811.1 | flagellar hook assembly protein FlgD | - |
| WV34_RS08825 (WV34_08625) | flgG | 1714966..1715742 (+) | 777 | WP_013352263.1 | flagellar basal body rod protein FlgG | - |
| WV34_RS08830 (WV34_08630) | - | 1715782..1715997 (+) | 216 | WP_013352264.1 | flagellar FlbD family protein | - |
| WV34_RS08835 (WV34_08635) | fliL | 1715994..1716413 (+) | 420 | WP_013352265.1 | flagellar basal body-associated protein FliL | - |
| WV34_RS08840 (WV34_08640) | fliM | 1716447..1717445 (+) | 999 | WP_013352266.1 | flagellar motor switch protein FliM | - |
| WV34_RS08845 (WV34_08645) | fliY | 1717435..1718568 (+) | 1134 | WP_013352267.1 | flagellar motor switch phosphatase FliY | - |
| WV34_RS08850 (WV34_08650) | pilH | 1718595..1718957 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| WV34_RS08855 (WV34_08655) | fliZ | 1718972..1719625 (+) | 654 | WP_013352268.1 | flagella biosynthesis regulatory protein FliZ | - |
| WV34_RS08860 (WV34_08660) | fliP | 1719618..1720283 (+) | 666 | WP_013352269.1 | flagellar type III secretion system pore protein FliP | - |
| WV34_RS08865 (WV34_08665) | fliQ | 1720298..1720567 (+) | 270 | WP_013352270.1 | flagellar biosynthesis protein FliQ | - |
| WV34_RS08870 (WV34_08670) | fliR | 1720574..1721353 (+) | 780 | WP_045506167.1 | flagellar biosynthetic protein FliR | - |
| WV34_RS08875 (WV34_08675) | flhB | 1721353..1722432 (+) | 1080 | WP_088612805.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=126792 WV34_RS08850 WP_003154238.1 1718595..1718957(+) (pilH) [Bacillus amyloliquefaciens strain MT45]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=126792 WV34_RS08850 WP_003154238.1 1718595..1718957(+) (pilH) [Bacillus amyloliquefaciens strain MT45]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTTGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTTAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTAAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTTGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTTAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTAAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |