Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   WV34_RS00520 Genome accession   NZ_CP011252
Coordinates   102426..103508 (+) Length   360 a.a.
NCBI ID   WP_014469611.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain MT45     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 97426..108508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WV34_RS00505 (WV34_00500) - 97426..98517 (+) 1092 WP_013350790.1 protein arginine kinase -
  WV34_RS00510 (WV34_00505) clpC 98514..100949 (+) 2436 WP_065521559.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  WV34_RS00515 (WV34_00510) radA/sms 101043..102422 (+) 1380 WP_045514053.1 DNA repair protein RadA Machinery gene
  WV34_RS00520 (WV34_00515) disA 102426..103508 (+) 1083 WP_014469611.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  WV34_RS00525 (WV34_00520) - 103622..104722 (+) 1101 WP_013350794.1 PIN/TRAM domain-containing protein -
  WV34_RS00530 (WV34_00525) ispD 104736..105434 (+) 699 WP_088613806.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  WV34_RS00535 (WV34_00530) ispF 105427..105903 (+) 477 WP_013350796.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  WV34_RS00540 (WV34_00535) gltX 105995..107446 (+) 1452 WP_045514062.1 glutamate--tRNA ligase -
  WV34_RS00545 (WV34_00540) cysE 107758..108411 (+) 654 WP_003156410.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40643.16 Da        Isoelectric Point: 5.5321

>NTDB_id=126731 WV34_RS00520 WP_014469611.1 102426..103508(+) (disA) [Bacillus amyloliquefaciens strain MT45]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATAEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=126731 WV34_RS00520 WP_014469611.1 102426..103508(+) (disA) [Bacillus amyloliquefaciens strain MT45]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATCCTGCAGTTCGTTGCACCGGGAACCCCGCT
CAGAGCCGGGATAGAAAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAACAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGGGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACCCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGACACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATAGCCATTTCTGAACGCAGAAATG
TCATTACGTTATACCAGGACAGCATGAAGTACACACTAAAGGACATAGGCTTTATTTTAACAAAGGCTAACCAGGCCATT
CAAACGCTTGAGAAGTATAAAACCATTCTAGACAAAACGATTACAGCTTTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCACCGGTATGAAATGGTGCTCCGTATAAAAAATGAAATCAACATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGATATGGAAGAAGAAGCGGCTCTTTTC
ATCAAAGACTATGTAAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTCTGTTTAAGCTGCTTGGATATCCCGCTTCTACCAATCTCGATGATTATGTCCTGCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCATTCGGATTTTTGCCAAGC
ATAACAGAAGCCACAGCCGAAGAGCTGGATGATGTGGAAGGTATCGGCGAGGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTCCAAGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.722

100

0.947


Multiple sequence alignment