Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   WV34_RS00205 Genome accession   NZ_CP011252
Coordinates   42417..43244 (+) Length   275 a.a.
NCBI ID   WP_013350747.1    Uniprot ID   A0A9P1JDV1
Organism   Bacillus amyloliquefaciens strain MT45     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 37417..48244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WV34_RS00180 (WV34_00175) - 38492..39925 (+) 1434 WP_088612028.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  WV34_RS00185 (WV34_00180) tmk 39922..40560 (+) 639 WP_088612029.1 dTMP kinase -
  WV34_RS00190 (WV34_00185) darA 40631..40960 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  WV34_RS00195 (WV34_00190) - 40973..41413 (+) 441 WP_045513461.1 DUF327 family protein -
  WV34_RS00200 (WV34_00195) holB 41425..42414 (+) 990 WP_065521834.1 DNA polymerase III subunit delta' -
  WV34_RS00205 (WV34_00200) yaaT 42417..43244 (+) 828 WP_013350747.1 competence/sporulation regulator complex protein RicT Regulator
  WV34_RS00210 (WV34_00205) yabA 43259..43618 (+) 360 WP_013350748.1 replication initiation-control protein YabA -
  WV34_RS00215 (WV34_00210) - 43679..44422 (+) 744 WP_088612030.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  WV34_RS00220 (WV34_00215) - 44409..44708 (+) 300 WP_088612031.1 GIY-YIG nuclease family protein -
  WV34_RS00225 (WV34_00220) rsmI 44683..45564 (+) 882 WP_088612032.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  WV34_RS00230 (WV34_00225) abrB 45614..45904 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31174.96 Da        Isoelectric Point: 4.6504

>NTDB_id=126726 WV34_RS00205 WP_013350747.1 42417..43244(+) (yaaT) [Bacillus amyloliquefaciens strain MT45]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEICQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=126726 WV34_RS00205 WP_013350747.1 42417..43244(+) (yaaT) [Bacillus amyloliquefaciens strain MT45]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGAAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
GGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGACAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAAGTCATTCGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAA
GAGGCCCTGTCCGCTTTTGAAATCTGTCAGAAAAAAGTGGCTGATCACGGCTTAGATATGAAACTGGTTGATGTTGAGTT
TACGTTTGACCGCAATAAAGTCATTTTTTACTTCACAGCCGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACAAGAATCGAATTGCGCCAAATCGGTGTGAGGGACGAGGCAAAAATGCTCGGCGGTATCGGCCCG
TGCGGAAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAAATTTCGGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9P1JDV1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

97.091

100

0.971