Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   VT08_RS01125 Genome accession   NZ_CP011069
Coordinates   204170..204619 (+) Length   149 a.a.
NCBI ID   WP_002986120.1    Uniprot ID   A0A0H2UT44
Organism   Streptococcus pyogenes strain STAB09014     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 199170..209619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VT08_RS01110 (VT08_01110) - 201154..201825 (+) 672 WP_011284482.1 rhomboid family intramembrane serine protease -
  VT08_RS01115 (VT08_01115) galU 201924..202823 (-) 900 WP_002986125.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  VT08_RS01120 (VT08_01120) - 202856..203872 (-) 1017 WP_011284483.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  VT08_RS01125 (VT08_01125) rcrR 204170..204619 (+) 450 WP_002986120.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  VT08_RS01130 (VT08_01130) - 204612..206318 (+) 1707 WP_011284484.1 ABC transporter ATP-binding protein -
  VT08_RS01135 (VT08_01135) - 206321..208105 (+) 1785 WP_021340815.1 ABC transporter ATP-binding protein -
  VT08_RS01140 (VT08_01140) - 208223..208990 (+) 768 WP_011054158.1 epoxyqueuosine reductase QueH -
  VT08_RS01145 (VT08_01145) - 209100..209546 (+) 447 WP_002986111.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17343.25 Da        Isoelectric Point: 9.5568

>NTDB_id=126017 VT08_RS01125 WP_002986120.1 204170..204619(+) (rcrR) [Streptococcus pyogenes strain STAB09014]
MSQVIGDLRELIHQIEQISDEIAKKYDVEHLAGPQGYVLVFLAKHQNQEIFVKDIEKQLRISKSVASHLVKRMVKNGFIN
VMPSQVDKRYKQVVLAQVGRDKLPLLRECRKDIEHYFLKEITKEELLTAKKVIEQLKQNMLTYKGDNDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=126017 VT08_RS01125 WP_002986120.1 204170..204619(+) (rcrR) [Streptococcus pyogenes strain STAB09014]
ATGTCACAAGTGATAGGTGATTTACGTGAATTGATACATCAAATCGAACAAATTAGTGATGAGATTGCAAAAAAATATGA
TGTAGAACATCTAGCAGGTCCTCAAGGTTATGTTCTTGTTTTTTTAGCTAAACACCAAAATCAAGAAATATTTGTCAAAG
ATATTGAAAAACAACTTCGTATCTCAAAGTCAGTTGCTAGTCATTTAGTGAAACGTATGGTCAAAAATGGGTTTATCAAT
GTGATGCCTTCCCAAGTGGATAAGCGTTATAAGCAAGTAGTGTTAGCGCAGGTTGGTAGAGATAAATTGCCTTTGTTGCG
GGAGTGTCGTAAGGATATCGAGCACTATTTTTTAAAAGAAATTACAAAAGAAGAGTTGCTGACAGCGAAAAAAGTAATTG
AACAGCTCAAGCAAAATATGCTAACTTATAAAGGAGACAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UT44

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

47.143

93.96

0.443

Multiple sequence alignment