Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   VU19_RS00245 Genome accession   NZ_CP011068
Coordinates   33437..34192 (+) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain STAB10015     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28437..39192
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VU19_RS10755 - 30137..30418 (-) 282 WP_074375313.1 transposase -
  VU19_RS00235 (VU19_00235) pcsB 30840..32036 (+) 1197 WP_010921769.1 peptidoglycan hydrolase PcsB -
  VU19_RS00240 (VU19_00240) - 32289..33251 (+) 963 WP_021340855.1 ribose-phosphate diphosphokinase -
  VU19_RS00245 (VU19_00245) recO 33437..34192 (+) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  VU19_RS00250 (VU19_00250) plsX 34295..35302 (+) 1008 WP_011284400.1 phosphate acyltransferase PlsX -
  VU19_RS00255 (VU19_00255) - 35295..35537 (+) 243 WP_002987699.1 phosphopantetheine-binding protein -
  VU19_RS00260 (VU19_00260) purC 35688..36392 (+) 705 WP_002987701.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=125909 VU19_RS00245 WP_002986719.1 33437..34192(+) (recO) [Streptococcus pyogenes strain STAB10015]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=125909 VU19_RS00245 WP_002986719.1 33437..34192(+) (recO) [Streptococcus pyogenes strain STAB10015]
ATGCAACTAACAGAATCACTAGGCATCGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGCACTGATTTA
CCGCTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602