Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DP15_RS07305 Genome accession   NZ_CP008926
Coordinates   1435741..1436550 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain ATCC 19615     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1430741..1441550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DP15_RS07285 (DP15_1492) - 1431183..1432430 (+) 1248 WP_038432850.1 AMP-binding protein -
  DP15_RS07290 (DP15_1493) - 1432486..1433520 (+) 1035 WP_162472284.1 DUF3114 domain-containing protein -
  DP15_RS07295 (DP15_1494) vicR 1433682..1434392 (+) 711 WP_002985645.1 response regulator YycF Regulator
  DP15_RS07300 (DP15_1495) vicK 1434385..1435737 (+) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DP15_RS07305 (DP15_1496) vicX 1435741..1436550 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DP15_RS07310 (DP15_1497) rnc 1436982..1437674 (+) 693 WP_002985639.1 ribonuclease III -
  DP15_RS07315 (DP15_1498) smc 1437675..1441213 (+) 3539 Protein_1401 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=125811 DP15_RS07305 WP_002985641.1 1435741..1436550(+) (vicX) [Streptococcus pyogenes strain ATCC 19615]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=125811 DP15_RS07305 WP_002985641.1 1435741..1436550(+) (vicX) [Streptococcus pyogenes strain ATCC 19615]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment