Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ID09_RS11230 Genome accession   NZ_CP008921
Coordinates   2274469..2275233 (+) Length   254 a.a.
NCBI ID   WP_024381305.1    Uniprot ID   A0A075SL91
Organism   Streptococcus suis 6407     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2269469..2280233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ID09_RS11215 (ID09_11505) - 2271850..2272533 (-) 684 WP_004194526.1 YoaK family protein -
  ID09_RS11220 (ID09_11510) rlmH 2272558..2273037 (-) 480 WP_004194528.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ID09_RS11225 (ID09_11515) htrA 2273212..2274408 (+) 1197 WP_009911075.1 S1C family serine protease Regulator
  ID09_RS11230 (ID09_11520) spo0J 2274469..2275233 (+) 765 WP_024381305.1 ParB/RepB/Spo0J family partition protein Regulator
  ID09_RS11235 (ID09_11525) dnaA 2275436..2276809 (+) 1374 WP_024381306.1 chromosomal replication initiator protein DnaA -
  ID09_RS11240 (ID09_11530) dnaN 2276963..2278099 (+) 1137 WP_024381307.1 DNA polymerase III subunit beta -
  ID09_RS11245 (ID09_11535) - 2278191..2279072 (+) 882 WP_024381308.1 diacylglycerol/lipid kinase family protein -
  ID09_RS11250 (ID09_11540) - 2279082..2279285 (+) 204 WP_024381309.1 DUF951 domain-containing protein -
  ID09_RS11255 (ID09_11545) - 2279389..2279748 (+) 360 WP_024381310.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28965.27 Da        Isoelectric Point: 9.6779

>NTDB_id=125720 ID09_RS11230 WP_024381305.1 2274469..2275233(+) (spo0J) [Streptococcus suis 6407]
MEELRTLNISKIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGQISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=125720 ID09_RS11230 WP_024381305.1 2274469..2275233(+) (spo0J) [Streptococcus suis 6407]
ATGGAAGAATTACGTACACTAAATATTTCAAAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCCATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCAATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACACATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGACAAATTTCACAAGGGCACGCA
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A075SL91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547

Multiple sequence alignment