Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HZ99_RS15485 Genome accession   NZ_CP008896
Coordinates   3463188..3463595 (-) Length   135 a.a.
NCBI ID   WP_038444124.1    Uniprot ID   A0A379IM27
Organism   Pseudomonas fluorescens strain UK4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3458188..3468595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZ99_RS15470 (HZ99_15845) - 3460180..3462231 (-) 2052 WP_038444118.1 methyl-accepting chemotaxis protein -
  HZ99_RS15475 (HZ99_15850) - 3462228..3462764 (-) 537 WP_038444120.1 chemotaxis protein CheW -
  HZ99_RS15480 (HZ99_15855) pilH 3462777..3463142 (-) 366 WP_038444122.1 twitching motility response regulator PilH -
  HZ99_RS15485 (HZ99_15860) pilG 3463188..3463595 (-) 408 WP_038444124.1 twitching motility response regulator PilG Regulator
  HZ99_RS15490 (HZ99_15865) gshB 3463835..3464788 (+) 954 WP_038444126.1 glutathione synthase -
  HZ99_RS15495 (HZ99_15870) - 3464866..3465765 (+) 900 WP_038444128.1 energy transducer TonB -
  HZ99_RS15500 (HZ99_15875) - 3465915..3466484 (+) 570 WP_038444130.1 YqgE/AlgH family protein -
  HZ99_RS15505 (HZ99_15880) ruvX 3466484..3466921 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  HZ99_RS15510 (HZ99_15885) pyrR 3467004..3467510 (+) 507 WP_038444133.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HZ99_RS15515 (HZ99_15890) - 3467535..3468539 (+) 1005 WP_038444135.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14874.42 Da        Isoelectric Point: 7.3534

>NTDB_id=125525 HZ99_RS15485 WP_038444124.1 3463188..3463595(-) (pilG) [Pseudomonas fluorescens strain UK4]
MEQHSNALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
AIPVIMLSSRDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKACVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=125525 HZ99_RS15485 WP_038444124.1 3463188..3463595(-) (pilG) [Pseudomonas fluorescens strain UK4]
ATGGAACAGCATTCCAACGCCTTGAAAGTGATGGTGATCGACGACTCGAAAACGATTCGCCGCACCGCTGAAACGCTGTT
GAAGAACGTAGGGTGTGAAGTCATCACGGCCATCGACGGTTTTGATGCCCTGGCCAGGATCGTTGACCATCATCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTCAAGAACAACCCGGCGTTCAAG
GCCATCCCGGTGATCATGCTGTCGTCCAGGGATGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGCGTCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGTGCGATCAAGGCCTGTGTGCCGGGGTTCGCTGCAGTAGAACAAG
CACATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A379IM27

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.131

90.37

0.652

Multiple sequence alignment