Detailed information NTG0125461

Bioinformatically predicted

Overview

• Name: treR
• Type: Regulator
• Locus tag: B723_RS10805
• Genome accession: NZ_CP010945
• Coordinates: 2380479..2381183 (-)
• Length: 234 a.a.
• NCBI ID: WP_017340295.1
• Uniprot ID: -
• Organism: Pseudomonas fluorescens NCIMB 11764
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 2375479..2386183

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B723_RS10795 (B723_10815)	guaA	2375688..2377265 (+)	1578	WP_017340297.1	glutamine-hydrolyzing GMP synthase	-
B723_RS10800 (B723_10820)	-	2377338..2380379 (-)	3042	WP_017340296.1	membrane-targeted effector domain-containing toxin	-
B723_RS10805 (B723_10825)	treR	2380479..2381183 (-)	705	WP_017340295.1	trehalose operon repressor	Regulator
B723_RS10810 (B723_10830)	treP	2381422..2382864 (+)	1443	WP_017340294.1	PTS system trehalose-specific EIIBC component	-
B723_RS10815 (B723_10835)	treC	2382977..2384626 (+)	1650	WP_017340293.1	alpha,alpha-phosphotrehalase	-
B723_RS10820 (B723_10840)	-	2384722..2385945 (+)	1224	WP_031319080.1	carbohydrate porin	-

Sequence

Protein

• Length: 234 a.a.
• Molecular weight: 26636.00 Da
• Isoelectric Point: 6.0905

>NTDB_id=125461 B723_RS10805 WP_017340295.1 2380479..2381183(-) (treR) [Pseudomonas fluorescens NCIMB 11764]
MSKYNQIYSDLLASITTERLERGARLPSETELMDSYQASRGTVRKAIEQLQERGFAQKVHGKGTFVLSTDPIEFQLGGIV
SFQETHPRLGNNVSTEVVEFSQIPLEGALLEHIKAEEGSLITRIKRVRRIDGKRVILDINHFVSDVIPGLSRDIAEHSIY
AFIEQTLQLQIAYAQRTIEAVPCSKDDQQHLDLDGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDVARR

Nucleotide

• Length: 705 bp

>NTDB_id=125461 B723_RS10805 WP_017340295.1 2380479..2381183(-) (treR) [Pseudomonas fluorescens NCIMB 11764]
ATGAGTAAATACAACCAGATCTACAGCGATCTGCTTGCCAGCATCACGACCGAACGTCTGGAGCGCGGCGCCCGGTTGCC
CTCCGAAACCGAATTGATGGACAGCTATCAGGCCAGTCGCGGCACCGTGCGCAAAGCCATCGAACAATTACAGGAGCGCG
GTTTCGCCCAGAAAGTCCACGGAAAAGGCACCTTTGTGTTGTCGACCGACCCGATCGAATTTCAGTTGGGTGGCATTGTC
AGCTTTCAGGAAACCCATCCGCGATTGGGCAACAACGTCAGCACCGAGGTGGTCGAGTTCAGCCAGATCCCGCTCGAAGG
TGCGTTGCTGGAACATATCAAGGCGGAAGAAGGCAGCCTGATCACGAGGATCAAACGCGTACGGCGGATCGATGGAAAAC
GAGTGATCCTCGACATCAACCATTTCGTCAGCGACGTCATTCCCGGACTCTCGCGGGACATCGCCGAACACTCGATCTAC
GCCTTCATCGAACAGACCCTGCAACTGCAAATCGCCTACGCCCAGCGCACCATCGAAGCCGTGCCCTGCAGCAAGGATGA
CCAGCAACACCTCGACCTCGACGGCCAGAGCCATGTGATCGTGGTCAGCAACCAGACGTTTCTGCAGGACGGCCGGCAGT
TCGAGTACACGGAATCCCGGCACACCCTCGACAAGTTCTATTTTTCGGATGTGGCACGGCGCTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, gntR family (GntR) (3-66)

• UTRA domain (UTRA) (90-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
treR	Streptococcus mutans UA159	39.744	100	0.397