Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | HV95_RS05665 | Genome accession | NZ_CP008864 |
| Coordinates | 1193671..1194228 (-) | Length | 185 a.a. |
| NCBI ID | WP_003102600.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain W60856 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1188671..1199228
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV95_RS05650 (HV95_31380) | pilY1 | 1188763..1192254 (-) | 3492 | WP_003102607.1 | type 4a pilus biogenesis protein PilY1 | - |
| HV95_RS05655 (HV95_31385) | pilX | 1192266..1192853 (-) | 588 | WP_003102605.1 | type 4a pilus minor pilin PilX | - |
| HV95_RS05660 (HV95_31390) | pilW | 1192850..1193674 (-) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| HV95_RS05665 (HV95_31395) | pilV | 1193671..1194228 (-) | 558 | WP_003102600.1 | type 4a pilus minor pilin PilV | Machinery gene |
| HV95_RS05670 (HV95_31400) | - | 1194219..1194725 (-) | 507 | WP_003102598.1 | GspH/FimT family pseudopilin | - |
| HV95_RS05675 (HV95_31405) | - | 1194831..1195340 (-) | 510 | WP_003102595.1 | GspH/FimT family pseudopilin | - |
| HV95_RS05680 (HV95_31410) | thiO | 1195475..1196569 (+) | 1095 | WP_020750388.1 | glycine oxidase ThiO | - |
| HV95_RS05685 (HV95_31415) | pilR | 1196615..1197952 (-) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20047.13 Da Isoelectric Point: 8.2254
>NTDB_id=125023 HV95_RS05665 WP_003102600.1 1193671..1194228(-) (pilV) [Pseudomonas aeruginosa strain W60856]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=125023 HV95_RS05665 WP_003102600.1 1193671..1194228(-) (pilV) [Pseudomonas aeruginosa strain W60856]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTAGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTAGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |