Detailed information NTG0124846

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: RDF_RS06325
• Genome accession: NZ_CP010867
• Coordinates: 1242945..1245143 (-)
• Length: 732 a.a.
• NCBI ID: WP_000622227.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain SS1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1237945..1250143

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDF_RS06305 (RDF_1200)	-	1238003..1238686 (-)	684	WP_000365677.1	tRNA (adenine(22)-N(1))-methyltransferase	-
RDF_RS06310 (RDF_1201)	-	1238790..1239470 (-)	681	WP_000221657.1	DnaD domain-containing protein	-
RDF_RS06315 (RDF_1202)	-	1239588..1240106 (-)	519	WP_000365343.1	adenine phosphoribosyltransferase	-
RDF_RS06320 (RDF_1203)	-	1240229..1242793 (-)	2565	WP_001247509.1	GBS Bsp-like repeat-containing protein	-
RDF_RS06325 (RDF_1204)	recJ	1242945..1245143 (-)	2199	WP_000622227.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
RDF_RS06330 (RDF_1205)	-	1245140..1245901 (-)	762	WP_000124587.1	SDR family NAD(P)-dependent oxidoreductase	-
RDF_RS06335 (RDF_1206)	rnz	1245903..1246832 (-)	930	WP_000405388.1	ribonuclease Z	-
RDF_RS06340 (RDF_1207)	-	1246874..1247521 (-)	648	WP_000568324.1	cystathionine beta-lyase	-
RDF_RS06345 (RDF_1208)	hflX	1247514..1248752 (-)	1239	WP_000573351.1	GTPase HflX	-
RDF_RS06350 (RDF_1209)	miaA	1248843..1249733 (-)	891	WP_001226486.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
RDF_RS06355 (RDF_1210)	-	1249844..1250020 (+)	177	WP_000239229.1	DUF3042 family protein	-

Sequence

Protein

• Length: 732 a.a.
• Molecular weight: 82279.93 Da
• Isoelectric Point: 4.5370

>NTDB_id=124846 RDF_RS06325 WP_000622227.1 1242945..1245143(-) (recJ) [Streptococcus agalactiae strain SS1]
MISAKYSWVLNNQKPDAGFFEASKKEKISEAVASLIYSRGIKTSAELHHFLQTNLENLHDPYLLNDMDKAVNRIRRAIEN
NETILVYGDYDADGMTSASIMKEALDMMGAEVQVYLPNRFTDGYGPNESVYKYFIEQQDVSLIITVDNGVAGHEAIAYAQ
NQGVDVVVTDHHSMPADLPCAYAIIHPEHPDANYPFPYLAGCGVAFKVACALLETIPTEMLDLVAIGTIADMVSLTDENR
IMVKAGLEVMKDSERIGLQELISLSNIDLKTLNEETIGFKIAPQLNALGRLDDPNPAIELLTGFDDEESQAIAQMIDQKN
EERKEIVQTIFDQAMQMLDQTKPVQVLAKENWHPGVLGIVAGRILERTGQPVIVLNIEDGIAKGSARSVEALDIFQAFDQ
HRELFIAFGGHSGAAGMTLEESKVGDLSQVLCDYISKKQLDMSQKKTLTIDSELRFDELSLDTVRDFEKLAPFGMDNKKP
VFLLKDFKVSQARVMGQNSAHLKLKLEQDGQALDLVAFNMGSQLQEFQQAQHLELAVTLSVNQWNGATTLQLMLEDARVD
GIQLFDIRSKASSLPHGVPILSQEEQSKEVILLTVPDHPQELKQMTQGKQFDAIYFKNEIPKNYFISGYGTRDQFASLYK
TIYQFPEFDVRYKLKELSSYLHIPDILLIKMIQIFEELHFVTITEGIMTVNKEAEKRDISESQIYQELKETVKFQELMAL
GTPKEIYDFMMS

Nucleotide

• Length: 2199 bp

>NTDB_id=124846 RDF_RS06325 WP_000622227.1 1242945..1245143(-) (recJ) [Streptococcus agalactiae strain SS1]
ATGATATCTGCTAAGTATAGTTGGGTCCTCAATAACCAAAAGCCAGACGCTGGCTTTTTTGAGGCTTCAAAAAAAGAAAA
GATAAGTGAAGCGGTGGCTTCCTTAATTTATTCGCGAGGTATTAAGACATCAGCGGAATTACATCATTTTTTACAAACTA
ATTTGGAAAATCTCCATGATCCTTATTTGTTAAATGATATGGATAAAGCTGTTAATCGTATTAGACGAGCTATTGAAAAT
AATGAAACTATTTTAGTTTATGGAGACTATGATGCTGATGGAATGACATCAGCATCAATCATGAAAGAAGCTTTAGATAT
GATGGGAGCTGAAGTCCAGGTTTATCTCCCAAATCGTTTTACAGATGGTTACGGTCCCAATGAAAGTGTTTATAAATATT
TTATTGAACAACAAGATGTTTCATTAATCATTACGGTTGATAATGGTGTGGCAGGGCATGAAGCAATTGCATATGCTCAA
AATCAAGGTGTGGACGTGGTAGTTACTGATCATCACAGTATGCCAGCAGATTTACCTTGTGCTTATGCTATTATTCACCC
AGAACATCCTGATGCTAATTATCCATTTCCTTATTTAGCAGGGTGTGGTGTTGCTTTTAAAGTAGCTTGTGCTCTCTTAG
AAACAATCCCGACAGAAATGTTGGATTTGGTTGCTATTGGGACGATTGCAGATATGGTTAGCCTAACTGATGAAAATCGT
ATCATGGTAAAAGCTGGACTTGAAGTTATGAAAGATAGTGAAAGAATAGGCTTACAGGAGCTAATATCTTTATCAAATAT
TGATTTAAAAACACTAAATGAAGAAACTATTGGATTTAAAATTGCTCCACAATTAAACGCTTTAGGAAGACTCGATGACC
CTAATCCAGCTATTGAATTACTGACAGGGTTTGATGATGAAGAATCTCAAGCAATAGCCCAAATGATTGATCAAAAAAAT
GAAGAGCGCAAAGAAATCGTTCAAACTATCTTTGACCAAGCTATGCAAATGCTTGATCAAACAAAGCCTGTACAAGTTTT
AGCAAAAGAAAATTGGCATCCAGGGGTTTTAGGTATTGTGGCGGGTCGTATTTTAGAGAGAACTGGACAACCTGTTATTG
TTTTGAATATTGAAGATGGTATTGCTAAAGGAAGTGCCAGAAGTGTAGAAGCACTTGATATTTTTCAAGCTTTTGACCAG
CATCGAGAATTATTCATTGCTTTTGGAGGTCACAGCGGAGCAGCAGGCATGACTTTAGAGGAAAGTAAGGTGGGTGATCT
TTCTCAAGTTTTATGTGACTATATCTCTAAAAAACAATTGGACATGAGTCAGAAAAAAACTCTGACAATTGATAGTGAGC
TACGTTTTGACGAACTTAGTTTAGACACTGTTAGAGATTTTGAAAAGTTAGCGCCATTTGGAATGGATAATAAAAAGCCA
GTCTTTTTGTTAAAAGATTTTAAAGTGAGTCAAGCTAGAGTCATGGGGCAAAACAGTGCTCATCTGAAATTAAAACTAGA
ACAAGATGGACAAGCACTTGATTTGGTAGCATTTAATATGGGGAGTCAACTACAAGAGTTCCAACAAGCACAACATTTGG
AGTTAGCTGTCACTTTATCTGTTAATCAATGGAATGGTGCCACAACCCTACAATTAATGTTGGAGGATGCGCGTGTAGAC
GGTATTCAATTATTTGATATTAGAAGCAAAGCAAGTAGCTTACCTCATGGAGTGCCAATCCTATCTCAAGAAGAGCAGAG
CAAAGAAGTTATTCTTTTGACTGTTCCCGATCATCCACAAGAATTAAAACAAATGACTCAAGGTAAACAGTTTGATGCCA
TCTATTTTAAAAATGAGATACCAAAAAATTATTTTATATCTGGTTATGGTACACGTGATCAGTTTGCTAGTTTATATAAA
ACAATATATCAATTCCCAGAATTTGACGTTCGTTATAAGTTAAAAGAGCTCAGTTCCTACCTTCATATCCCTGATATTTT
ATTAATTAAAATGATTCAAATTTTTGAAGAACTACATTTTGTTACGATTACAGAAGGGATTATGACAGTCAATAAAGAAG
CAGAAAAGCGAGATATCTCTGAGAGTCAAATTTATCAAGAATTAAAAGAGACAGTTAAGTTTCAAGAATTAATGGCTTTA
GGGACACCTAAAGAAATATATGATTTTATGATGAGTTGA

Domains

Predicted by InterProScan.

• DHHA1 domain (DHHA1) (317-433)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (583-726)

• DHH family (DHH) (83-228)

• RecJ OB domain (RecJ_OB) (450-556)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	64.993	100	0.654
recJ	Bacillus subtilis subsp. subtilis str. 168	36.01	100	0.38