Detailed information NTG0124777

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: TK78_RS33155
• Genome accession: NZ_CP010833
• Coordinates: 7533229..7534260 (+)
• Length: 343 a.a.
• NCBI ID: WP_075267868.1
• Uniprot ID: -
• Organism: Streptomyces sp. Tue 6075 strain Tue6075
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 7528229..7539260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TK78_RS33135 (TK78_32515)	-	7528233..7529315 (+)	1083	WP_075267865.1	ABC transporter substrate-binding protein	-
TK78_RS33140 (TK78_32520)	-	7529450..7531162 (+)	1713	WP_075267866.1	sugar ABC transporter ATP-binding protein	-
TK78_RS33145 (TK78_32525)	-	7531159..7532133 (+)	975	WP_030712918.1	ABC transporter permease	-
TK78_RS33150 (TK78_32530)	-	7532130..7533182 (+)	1053	WP_075267867.1	ABC transporter permease	-
TK78_RS33155 (TK78_32535)	cytR	7533229..7534260 (+)	1032	WP_075267868.1	LacI family DNA-binding transcriptional regulator	Regulator
TK78_RS33160 (TK78_32540)	-	7534303..7535370 (+)	1068	WP_075267869.1	aldose epimerase family protein	-
TK78_RS33165 (TK78_32545)	-	7535558..7536193 (+)	636	WP_032788744.1	LysE family translocator	-
TK78_RS33170 (TK78_32550)	-	7536247..7536831 (-)	585	WP_275297727.1	TetR/AcrR family transcriptional regulator	-
TK78_RS33175 (TK78_32555)	-	7536925..7537785 (+)	861	WP_075267870.1	alpha/beta hydrolase	-
TK78_RS35840	-	7537894..7538136 (-)	243	Protein_6558	transposase	-
TK78_RS33185 (TK78_32560)	-	7538402..7538719 (-)	318	WP_075267871.1	pentapeptide repeat-containing protein	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37329.36 Da
• Isoelectric Point: 6.3502

>NTDB_id=124777 TK78_RS33155 WP_075267868.1 7533229..7534260(+) (cytR) [Streptomyces sp. Tue 6075 strain Tue6075]
MGVSLKDVAQRAGVSIKTVSNVVNNYQHVTPKMRAKVQQAIDELGYRPNLTARHLRKGRTGIIALAVPEFGNPYFAELAG
EVVDAAARHDYTVLVDHTAGQREKELLVCQGFRSHVIDGLILSPIHLETEDLMARTETAPLVLLGEREYEAPYDHIAIDN
VAAAREAVAHLIALGHRRIAFLGSRTGRERQPAHLRLRGWREELAASGITPDESLVVVTDGYGREDGAAAMASLLDRGER
PDAVFAYNDLIAIGAMRTITERGLTVPDDIAVVGFDDIEESRYGATTLTTIAPDKTAIARLAVDSLVERLAGTPVAEPRR
PRPGYRLVVRESTTPREPSGPAS

Nucleotide

• Length: 1032 bp

>NTDB_id=124777 TK78_RS33155 WP_075267868.1 7533229..7534260(+) (cytR) [Streptomyces sp. Tue 6075 strain Tue6075]
GTGGGCGTCAGCCTCAAGGACGTAGCTCAACGGGCGGGCGTGTCCATCAAGACCGTGTCGAACGTGGTCAACAACTACCA
GCACGTCACCCCGAAGATGCGGGCCAAGGTGCAGCAGGCGATCGACGAGCTCGGCTACCGGCCGAACCTCACCGCCCGCC
ATCTGCGCAAGGGCCGCACCGGCATCATCGCGCTGGCCGTCCCCGAATTCGGCAACCCGTACTTCGCGGAGCTGGCCGGC
GAGGTCGTCGACGCGGCGGCCCGGCACGACTACACCGTCCTGGTCGACCACACGGCGGGCCAGCGCGAGAAGGAGCTGCT
GGTCTGCCAGGGATTCCGCTCCCACGTCATCGACGGGCTCATCCTCAGCCCCATCCACCTGGAGACCGAGGACCTGATGG
CCCGCACCGAGACCGCGCCGCTGGTGCTGCTCGGCGAACGCGAGTACGAGGCCCCGTACGACCACATCGCCATCGACAAC
GTGGCCGCCGCCCGTGAGGCCGTCGCCCACCTCATCGCGCTGGGCCACCGGCGTATCGCCTTCCTCGGCTCCCGCACCGG
GCGGGAACGCCAGCCCGCCCACCTCAGGCTGCGCGGCTGGCGTGAGGAGCTGGCCGCCTCCGGCATCACCCCCGACGAGT
CCCTGGTCGTCGTCACCGACGGCTACGGCCGTGAGGACGGGGCCGCCGCGATGGCCTCCCTCCTCGACCGGGGCGAGCGG
CCCGACGCGGTGTTCGCGTACAACGACCTGATCGCGATCGGGGCCATGCGCACCATCACGGAGCGCGGCCTCACCGTTCC
GGACGACATCGCCGTCGTCGGCTTCGACGACATCGAGGAGAGCCGGTACGGGGCCACCACGCTCACCACCATCGCGCCGG
ACAAGACGGCCATCGCCCGGCTCGCCGTCGACAGCCTCGTCGAACGCCTCGCCGGCACCCCGGTCGCCGAACCCCGGCGG
CCCCGCCCCGGCTACCGCCTCGTCGTCCGCGAATCCACCACGCCCCGCGAGCCCTCCGGCCCGGCGAGCTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-333)

• Bacterial regulatory proteins, lacI family (LacI) (4-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	35.942	100	0.362