Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | TK78_RS32355 | Genome accession | NZ_CP010833 |
| Coordinates | 7351463..7353991 (+) | Length | 842 a.a. |
| NCBI ID | WP_075267682.1 | Uniprot ID | - |
| Organism | Streptomyces sp. Tue 6075 strain Tue6075 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 7346463..7358991
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TK78_RS32345 (TK78_31740) | - | 7347482..7349302 (-) | 1821 | WP_159027457.1 | hypothetical protein | - |
| TK78_RS32350 (TK78_31745) | - | 7349848..7351362 (+) | 1515 | WP_079181571.1 | transposase | - |
| TK78_RS32355 (TK78_31750) | clpC | 7351463..7353991 (+) | 2529 | WP_075267682.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| TK78_RS36145 | - | 7353995..7354171 (+) | 177 | WP_006122695.1 | hypothetical protein | - |
| TK78_RS36890 | - | 7354203..7354436 (-) | 234 | Protein_6389 | LysR family transcriptional regulator | - |
| TK78_RS36660 | - | 7354566..7355078 (+) | 513 | Protein_6390 | FUSC family protein | - |
| TK78_RS32370 (TK78_31755) | - | 7355012..7357342 (-) | 2331 | WP_075267684.1 | FdhF/YdeP family oxidoreductase | - |
| TK78_RS32375 (TK78_31760) | - | 7357632..7358276 (+) | 645 | WP_079181650.1 | DUF1345 domain-containing protein | - |
Sequence
Protein
Download Length: 842 a.a. Molecular weight: 91049.22 Da Isoelectric Point: 4.5931
>NTDB_id=124775 TK78_RS32355 WP_075267682.1 7351463..7353991(+) (clpC) [Streptomyces sp. Tue 6075 strain Tue6075]
MSMAFGSPLGPSDPFSDLLNRFFGMSPASSPPAMQRVPIGRLLTESSHELLGRATSKAAEDGTADLDTEHLLWAATQVEP
SRGLLSRAGVDPDALASQLDEVLPRESAEPSAEPGLTPAAKRTLTAAYARSQAAGVSYIGPEHILGALIDDADSGAGRFL
GSDDLDVGKLRGAADRTAGPDGASGGAKQPATTLDEFGRDLTEEAKAGKLDPVVGRAEEIEQTIEILSRRSKNNPVLIGE
PGVGKTAIVEGLAQSIVAGEVPDTLKDKRVVSLDLSGMVAGAQYRGQFEERLKKVIEDVQKAEGEIILFIDELHTVVGAG
ATGEGSMDAGNMLKPALARGELHVVGATTIDEYRKHIEKDAALERRFQPVLVPEPTVEETVQILEGLRDAYEAHHQVRFA
DGALTAAAELSDRYISDRFLPDKAIDLMDQAGARVRLRSANRSTEVVSREDRLAKLRREKDEAVAGEEFEKASDLKRQIA
EVEGELAGIEERREGVVSVTASDIADIVSRRTGIPVSQLTAGEKEKLLKLEEEMHARIVGQDEAVTAVSEAVRRNRAGMG
DPNRPVGSFLFLGPTGVGKTELAKTLAELLFGQDDRMIRFDMSEFQEKHTVARLVGAPPGYVGYDEAGQLTEKVRRNPYS
VVLFDEVEKAHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNIGAHRILAHEGDAAELKDELMEELRGRFLPEFL
NRIDDIIVFHSLTENDLSEIVDHLLDRSKHRVHAQGMTLEVTEAAKKLLVAHGYQPEFGARPLRRTIQTELDNRVASLLL
GGEADPGDTIVADVVDDSLHCTIRKGDGDGETPAADTPDGEE
MSMAFGSPLGPSDPFSDLLNRFFGMSPASSPPAMQRVPIGRLLTESSHELLGRATSKAAEDGTADLDTEHLLWAATQVEP
SRGLLSRAGVDPDALASQLDEVLPRESAEPSAEPGLTPAAKRTLTAAYARSQAAGVSYIGPEHILGALIDDADSGAGRFL
GSDDLDVGKLRGAADRTAGPDGASGGAKQPATTLDEFGRDLTEEAKAGKLDPVVGRAEEIEQTIEILSRRSKNNPVLIGE
PGVGKTAIVEGLAQSIVAGEVPDTLKDKRVVSLDLSGMVAGAQYRGQFEERLKKVIEDVQKAEGEIILFIDELHTVVGAG
ATGEGSMDAGNMLKPALARGELHVVGATTIDEYRKHIEKDAALERRFQPVLVPEPTVEETVQILEGLRDAYEAHHQVRFA
DGALTAAAELSDRYISDRFLPDKAIDLMDQAGARVRLRSANRSTEVVSREDRLAKLRREKDEAVAGEEFEKASDLKRQIA
EVEGELAGIEERREGVVSVTASDIADIVSRRTGIPVSQLTAGEKEKLLKLEEEMHARIVGQDEAVTAVSEAVRRNRAGMG
DPNRPVGSFLFLGPTGVGKTELAKTLAELLFGQDDRMIRFDMSEFQEKHTVARLVGAPPGYVGYDEAGQLTEKVRRNPYS
VVLFDEVEKAHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNIGAHRILAHEGDAAELKDELMEELRGRFLPEFL
NRIDDIIVFHSLTENDLSEIVDHLLDRSKHRVHAQGMTLEVTEAAKKLLVAHGYQPEFGARPLRRTIQTELDNRVASLLL
GGEADPGDTIVADVVDDSLHCTIRKGDGDGETPAADTPDGEE
Nucleotide
Download Length: 2529 bp
>NTDB_id=124775 TK78_RS32355 WP_075267682.1 7351463..7353991(+) (clpC) [Streptomyces sp. Tue 6075 strain Tue6075]
ATGTCGATGGCGTTCGGTTCACCCCTCGGTCCGTCCGATCCGTTCAGCGATCTGCTGAACCGGTTCTTCGGGATGTCGCC
CGCTTCCTCGCCCCCCGCGATGCAGCGCGTCCCGATCGGGCGGCTGCTGACGGAGTCCTCCCACGAGCTGCTGGGCCGGG
CGACGAGCAAGGCGGCCGAGGACGGCACGGCGGACCTCGACACCGAGCATCTGCTGTGGGCGGCGACCCAGGTCGAGCCC
TCGCGCGGGCTGCTGTCCCGGGCGGGGGTCGACCCCGACGCGCTCGCCTCCCAGCTCGACGAGGTGCTGCCCCGGGAGTC
CGCCGAGCCGTCCGCCGAACCGGGACTCACCCCGGCGGCGAAGCGGACCCTCACCGCCGCCTACGCCCGCTCGCAGGCGG
CCGGGGTGTCCTACATCGGGCCCGAGCACATCCTCGGCGCGCTCATCGACGACGCGGACTCCGGGGCCGGGCGGTTCCTG
GGGTCGGACGACCTCGACGTGGGAAAGCTGCGCGGCGCGGCCGACCGGACGGCGGGCCCGGACGGGGCCTCCGGCGGGGC
CAAGCAGCCCGCTACGACTCTGGACGAATTCGGCCGGGACCTCACGGAGGAGGCGAAGGCGGGGAAGCTCGACCCCGTGG
TCGGGCGGGCCGAGGAGATCGAGCAGACCATCGAGATCCTCTCGCGGCGCTCCAAGAACAACCCCGTCCTCATCGGCGAG
CCCGGCGTCGGCAAGACCGCCATCGTGGAGGGTCTGGCCCAGAGCATCGTCGCGGGCGAGGTCCCCGACACCCTCAAGGA
CAAGCGGGTCGTCTCCCTGGACCTGTCCGGCATGGTCGCCGGAGCCCAGTACCGGGGCCAGTTCGAGGAGCGGCTGAAGA
AGGTCATCGAGGACGTGCAGAAGGCGGAGGGGGAGATCATCCTCTTCATCGACGAACTCCACACGGTCGTCGGCGCGGGC
GCCACCGGCGAGGGCTCGATGGACGCGGGCAACATGCTCAAGCCCGCCCTCGCCCGCGGGGAACTGCACGTCGTCGGCGC
GACGACGATCGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCCCTGGAGCGCCGCTTCCAGCCTGTCCTCGTCCCGG
AGCCCACCGTCGAGGAGACCGTACAGATCCTCGAAGGGCTGCGCGACGCCTACGAGGCCCATCACCAGGTCCGCTTCGCC
GACGGGGCCCTCACGGCCGCCGCCGAGCTGTCCGACCGCTACATCAGCGACCGCTTCCTGCCCGACAAGGCCATCGACCT
GATGGACCAGGCCGGGGCCCGCGTACGGCTGCGCAGCGCGAACCGCTCCACCGAGGTCGTCAGCCGCGAGGACCGCCTCG
CCAAACTGCGGCGGGAGAAGGACGAGGCCGTCGCGGGCGAGGAGTTCGAGAAGGCCTCGGACCTGAAGCGGCAGATCGCC
GAGGTCGAGGGCGAGCTCGCCGGGATCGAGGAGCGCCGCGAGGGCGTCGTCTCGGTCACCGCCTCCGACATCGCCGACAT
CGTCTCCCGCCGCACCGGCATCCCGGTCTCCCAGCTCACCGCCGGCGAGAAGGAGAAGCTCCTCAAGCTGGAGGAGGAGA
TGCACGCCCGGATCGTCGGCCAGGACGAGGCCGTCACCGCGGTCTCCGAAGCCGTACGCCGCAACCGCGCGGGCATGGGC
GACCCGAACCGGCCCGTCGGCTCGTTCCTCTTCCTCGGCCCCACCGGCGTCGGCAAGACGGAGCTGGCCAAGACACTCGC
CGAGCTGCTGTTCGGCCAGGACGACCGCATGATCCGCTTCGACATGAGCGAGTTCCAGGAGAAGCACACGGTCGCCCGGC
TCGTCGGAGCCCCTCCCGGATACGTCGGTTACGACGAGGCGGGCCAGCTCACCGAGAAGGTGCGGCGCAACCCCTACAGC
GTCGTCCTGTTCGACGAGGTCGAGAAGGCGCACCCCGACGTCTTCAACACGCTGCTCCAGATCCTCGACGACGGCCGCCT
CACCGACGGACAGGGCCGCACCGTCGACTTCCGCCACTGCGTCGTCATCATGACGTCCAACATCGGCGCCCACCGCATCC
TCGCCCACGAGGGCGACGCCGCCGAGCTCAAGGACGAGCTGATGGAGGAGCTGCGCGGCCGGTTCCTCCCCGAGTTCCTC
AACCGCATCGACGACATCATCGTCTTCCACAGCCTCACCGAGAACGACCTGTCCGAGATCGTCGACCACCTCCTGGACCG
CAGCAAGCACCGCGTCCACGCCCAGGGCATGACCCTGGAGGTCACCGAGGCGGCGAAGAAACTCCTGGTCGCGCACGGCT
ACCAGCCGGAGTTCGGCGCCCGCCCGCTGCGCCGCACGATCCAGACGGAACTGGACAACCGCGTCGCCTCCCTGCTGCTC
GGCGGCGAAGCCGACCCCGGGGACACGATCGTCGCCGACGTGGTCGACGACTCACTGCACTGCACCATCCGCAAGGGCGA
CGGCGACGGGGAGACCCCCGCCGCCGACACCCCCGACGGCGAGGAGTGA
ATGTCGATGGCGTTCGGTTCACCCCTCGGTCCGTCCGATCCGTTCAGCGATCTGCTGAACCGGTTCTTCGGGATGTCGCC
CGCTTCCTCGCCCCCCGCGATGCAGCGCGTCCCGATCGGGCGGCTGCTGACGGAGTCCTCCCACGAGCTGCTGGGCCGGG
CGACGAGCAAGGCGGCCGAGGACGGCACGGCGGACCTCGACACCGAGCATCTGCTGTGGGCGGCGACCCAGGTCGAGCCC
TCGCGCGGGCTGCTGTCCCGGGCGGGGGTCGACCCCGACGCGCTCGCCTCCCAGCTCGACGAGGTGCTGCCCCGGGAGTC
CGCCGAGCCGTCCGCCGAACCGGGACTCACCCCGGCGGCGAAGCGGACCCTCACCGCCGCCTACGCCCGCTCGCAGGCGG
CCGGGGTGTCCTACATCGGGCCCGAGCACATCCTCGGCGCGCTCATCGACGACGCGGACTCCGGGGCCGGGCGGTTCCTG
GGGTCGGACGACCTCGACGTGGGAAAGCTGCGCGGCGCGGCCGACCGGACGGCGGGCCCGGACGGGGCCTCCGGCGGGGC
CAAGCAGCCCGCTACGACTCTGGACGAATTCGGCCGGGACCTCACGGAGGAGGCGAAGGCGGGGAAGCTCGACCCCGTGG
TCGGGCGGGCCGAGGAGATCGAGCAGACCATCGAGATCCTCTCGCGGCGCTCCAAGAACAACCCCGTCCTCATCGGCGAG
CCCGGCGTCGGCAAGACCGCCATCGTGGAGGGTCTGGCCCAGAGCATCGTCGCGGGCGAGGTCCCCGACACCCTCAAGGA
CAAGCGGGTCGTCTCCCTGGACCTGTCCGGCATGGTCGCCGGAGCCCAGTACCGGGGCCAGTTCGAGGAGCGGCTGAAGA
AGGTCATCGAGGACGTGCAGAAGGCGGAGGGGGAGATCATCCTCTTCATCGACGAACTCCACACGGTCGTCGGCGCGGGC
GCCACCGGCGAGGGCTCGATGGACGCGGGCAACATGCTCAAGCCCGCCCTCGCCCGCGGGGAACTGCACGTCGTCGGCGC
GACGACGATCGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCCCTGGAGCGCCGCTTCCAGCCTGTCCTCGTCCCGG
AGCCCACCGTCGAGGAGACCGTACAGATCCTCGAAGGGCTGCGCGACGCCTACGAGGCCCATCACCAGGTCCGCTTCGCC
GACGGGGCCCTCACGGCCGCCGCCGAGCTGTCCGACCGCTACATCAGCGACCGCTTCCTGCCCGACAAGGCCATCGACCT
GATGGACCAGGCCGGGGCCCGCGTACGGCTGCGCAGCGCGAACCGCTCCACCGAGGTCGTCAGCCGCGAGGACCGCCTCG
CCAAACTGCGGCGGGAGAAGGACGAGGCCGTCGCGGGCGAGGAGTTCGAGAAGGCCTCGGACCTGAAGCGGCAGATCGCC
GAGGTCGAGGGCGAGCTCGCCGGGATCGAGGAGCGCCGCGAGGGCGTCGTCTCGGTCACCGCCTCCGACATCGCCGACAT
CGTCTCCCGCCGCACCGGCATCCCGGTCTCCCAGCTCACCGCCGGCGAGAAGGAGAAGCTCCTCAAGCTGGAGGAGGAGA
TGCACGCCCGGATCGTCGGCCAGGACGAGGCCGTCACCGCGGTCTCCGAAGCCGTACGCCGCAACCGCGCGGGCATGGGC
GACCCGAACCGGCCCGTCGGCTCGTTCCTCTTCCTCGGCCCCACCGGCGTCGGCAAGACGGAGCTGGCCAAGACACTCGC
CGAGCTGCTGTTCGGCCAGGACGACCGCATGATCCGCTTCGACATGAGCGAGTTCCAGGAGAAGCACACGGTCGCCCGGC
TCGTCGGAGCCCCTCCCGGATACGTCGGTTACGACGAGGCGGGCCAGCTCACCGAGAAGGTGCGGCGCAACCCCTACAGC
GTCGTCCTGTTCGACGAGGTCGAGAAGGCGCACCCCGACGTCTTCAACACGCTGCTCCAGATCCTCGACGACGGCCGCCT
CACCGACGGACAGGGCCGCACCGTCGACTTCCGCCACTGCGTCGTCATCATGACGTCCAACATCGGCGCCCACCGCATCC
TCGCCCACGAGGGCGACGCCGCCGAGCTCAAGGACGAGCTGATGGAGGAGCTGCGCGGCCGGTTCCTCCCCGAGTTCCTC
AACCGCATCGACGACATCATCGTCTTCCACAGCCTCACCGAGAACGACCTGTCCGAGATCGTCGACCACCTCCTGGACCG
CAGCAAGCACCGCGTCCACGCCCAGGGCATGACCCTGGAGGTCACCGAGGCGGCGAAGAAACTCCTGGTCGCGCACGGCT
ACCAGCCGGAGTTCGGCGCCCGCCCGCTGCGCCGCACGATCCAGACGGAACTGGACAACCGCGTCGCCTCCCTGCTGCTC
GGCGGCGAAGCCGACCCCGGGGACACGATCGTCGCCGACGTGGTCGACGACTCACTGCACTGCACCATCCGCAAGGGCGA
CGGCGACGGGGAGACCCCCGCCGCCGACACCCCCGACGGCGAGGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.25 |
95.012 |
0.487 |
| clpC | Streptococcus mutans UA159 |
42.354 |
97.862 |
0.414 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
44.106 |
93.705 |
0.413 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
53.643 |
76.603 |
0.411 |
| clpC | Streptococcus thermophilus LMD-9 |
44.874 |
89.192 |
0.4 |
| clpE | Streptococcus pneumoniae D39 |
53.76 |
74.228 |
0.399 |
| clpE | Streptococcus pneumoniae Rx1 |
53.76 |
74.228 |
0.399 |
| clpE | Streptococcus pneumoniae R6 |
53.76 |
74.228 |
0.399 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.686 |
74.109 |
0.398 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.341 |
89.192 |
0.395 |
| clpE | Streptococcus mutans UA159 |
53.722 |
73.397 |
0.394 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.315 |
84.917 |
0.385 |
| clpC | Streptococcus pneumoniae D39 |
45.175 |
84.917 |
0.384 |
| clpC | Streptococcus pneumoniae Rx1 |
45.175 |
84.917 |
0.384 |