Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | HYU01_RS06555 | Genome accession | NZ_CP008846 |
| Coordinates | 1226248..1226571 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus anthracis strain HYU01 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1221248..1231571
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYU01_RS06530 (HYU01_06570) | - | 1221555..1222841 (+) | 1287 | WP_000247038.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| HYU01_RS06535 (HYU01_06575) | sipW | 1223036..1223605 (+) | 570 | WP_000767813.1 | signal peptidase I SipW | - |
| HYU01_RS06540 (HYU01_06580) | - | 1223668..1224255 (+) | 588 | WP_000172839.1 | CalY family protein | - |
| HYU01_RS06545 (HYU01_06585) | - | 1224417..1225181 (+) | 765 | WP_000917476.1 | DUF4047 domain-containing protein | - |
| HYU01_RS06550 (HYU01_06590) | calY | 1225579..1226172 (+) | 594 | WP_000053732.1 | biofilm matrix protein CalY | - |
| HYU01_RS06555 (HYU01_06595) | sinR | 1226248..1226571 (-) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| HYU01_RS06560 (HYU01_06600) | - | 1226651..1226785 (-) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| HYU01_RS06565 (HYU01_06605) | inhA1 | 1227129..1229516 (+) | 2388 | WP_001035927.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| HYU01_RS06570 (HYU01_06610) | - | 1229688..1231055 (+) | 1368 | WP_000116805.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=124713 HYU01_RS06555 WP_000578878.1 1226248..1226571(-) (sinR) [Bacillus anthracis strain HYU01]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=124713 HYU01_RS06555 WP_000578878.1 1226248..1226571(-) (sinR) [Bacillus anthracis strain HYU01]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |