Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   TO73_RS11500 Genome accession   NZ_CP010822
Coordinates   2154832..2155638 (-) Length   268 a.a.
NCBI ID   WP_003049110.1    Uniprot ID   A0ABN4IMM4
Organism   Thermus aquaticus Y51MC23     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2149832..2160638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TO73_RS11470 (TO73_2383) - 2150196..2150594 (-) 399 WP_003049120.1 hypothetical protein -
  TO73_RS11475 (TO73_2384) - 2150731..2151258 (-) 528 WP_003049118.1 inorganic diphosphatase -
  TO73_RS11480 (TO73_2385) - 2151269..2151898 (-) 630 WP_003049117.1 glycerophosphodiester phosphodiesterase -
  TO73_RS11485 (TO73_2386) - 2151922..2152536 (+) 615 WP_003049115.1 YcxB family protein -
  TO73_RS11490 (TO73_2387) comEA 2152509..2152817 (+) 309 WP_003049113.1 ComEA family DNA-binding protein Machinery gene
  TO73_RS11495 (TO73_2388) comA/comEC 2152814..2154844 (+) 2031 WP_040684643.1 ComEC/Rec2 family competence protein Machinery gene
  TO73_RS11500 (TO73_2389) spo0J 2154832..2155638 (-) 807 WP_003049110.1 ParB/RepB/Spo0J family partition protein Regulator
  TO73_RS11505 (TO73_2390) soj 2155622..2156371 (-) 750 WP_003049107.1 chromosome-partitioning ATPase Soj -
  TO73_RS11510 (TO73_2391) rsmG 2156365..2157093 (-) 729 WP_003049106.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  TO73_RS11515 (TO73_2392) mnmG 2157119..2158909 (-) 1791 WP_003049104.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29564.25 Da        Isoelectric Point: 10.0080

>NTDB_id=124694 TO73_RS11500 WP_003049110.1 2154832..2155638(-) (spo0J) [Thermus aquaticus Y51MC23]
MSKKASGLGRGLEALLPKGGGGVVRLPLSAIRPNPGQPRRRFSQESLEELAQSIREKGLLQPILVRPKGDGYELVAGERR
YRAAQMAGLTEVPALVRDLTDREALELALVENLQREDLSPLEEARGYQALLSMGLTQEEVAKRVGKARSTVANALRLLQL
PEEVLRALEAGEITAGHARALLMLEPEDRLWGLKEILEKGLSVRQAEALRERLGREKGPKEPSPLSLELSRHLGLPVKVL
GGRRGRVVIHYRSLEELEALLERLGYQA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=124694 TO73_RS11500 WP_003049110.1 2154832..2155638(-) (spo0J) [Thermus aquaticus Y51MC23]
GTGTCCAAGAAGGCTAGCGGTCTTGGGAGGGGCCTCGAGGCCCTCCTGCCCAAGGGGGGCGGCGGGGTGGTGCGCCTCCC
CCTCTCGGCCATCCGGCCCAACCCCGGCCAGCCCCGGCGGCGCTTCTCCCAGGAGAGCCTGGAGGAGCTGGCCCAGTCCA
TCAGGGAAAAGGGGCTCCTCCAGCCCATCCTGGTGCGGCCAAAGGGGGACGGGTACGAGCTGGTGGCCGGGGAGAGGCGC
TACCGGGCGGCCCAGATGGCCGGGCTTACCGAGGTGCCGGCCCTGGTGCGGGACCTCACCGACCGGGAGGCCCTGGAGCT
GGCCCTGGTGGAAAACCTCCAGCGGGAGGACCTCTCCCCCCTGGAGGAGGCCCGGGGCTACCAGGCCCTTCTTTCCATGG
GCCTGACCCAGGAGGAGGTGGCCAAGCGGGTGGGCAAGGCCCGCTCCACGGTGGCCAACGCCCTGAGGCTTCTCCAGCTT
CCGGAAGAGGTCCTGAGGGCCCTGGAGGCAGGGGAGATCACCGCCGGGCACGCCCGGGCCCTCCTCATGCTGGAGCCCGA
GGACCGGCTTTGGGGCCTCAAGGAGATCCTGGAAAAGGGGCTTTCCGTGCGGCAGGCCGAGGCCCTAAGGGAGCGCTTGG
GCCGGGAGAAGGGGCCCAAGGAGCCCTCTCCCCTCTCCCTGGAGCTTTCCCGGCACCTGGGCCTGCCCGTCAAGGTGCTG
GGGGGACGTCGGGGCCGGGTGGTCATCCACTACCGCTCTTTGGAGGAGCTGGAGGCCCTTCTGGAGCGGCTCGGCTACCA
GGCGTAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(162-210)

ParB/Sulfiredoxin domain (ParB_N)

(26-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

43.825

93.657

0.41