Detailed information NTG0124555

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: VAB027_RS17330
• Genome accession: NZ_CP010812
• Coordinates: 3732647..3735469 (+)
• Length: 940 a.a.
• NCBI ID: WP_046127165.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain 10432-62
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3727647..3740469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VAB027_RS17310 (VAB027_3433)	csrD	3727841..3729853 (-)	2013	WP_002154885.1	RNase E specificity factor CsrD	-
VAB027_RS17315 (VAB027_3434)	ssb	3729977..3730510 (-)	534	WP_000168287.1	single-stranded DNA-binding protein	Machinery gene
VAB027_RS17320 (VAB027_3435)	qstR	3730802..3731446 (+)	645	WP_001188318.1	LuxR C-terminal-related transcriptional regulator	Regulator
VAB027_RS17325 (VAB027_3436)	galU	3731619..3732491 (+)	873	WP_001920788.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
VAB027_RS17330 (VAB027_3437)	uvrA	3732647..3735469 (+)	2823	WP_046127165.1	excinuclease ABC subunit UvrA	Machinery gene
VAB027_RS17335 (VAB027_3438)	-	3735534..3737318 (+)	1785	Protein_3337	oligosaccharyltransferase	-
VAB027_RS17340 (VAB027_3439)	-	3737397..3738515 (-)	1119	WP_046127166.1	alanine--glyoxylate aminotransferase family protein	-
VAB027_RS17345 (VAB027_3440)	lysC	3738979..3740334 (+)	1356	WP_046127167.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104357.89 Da
• Isoelectric Point: 6.5401

>NTDB_id=124555 VAB027_RS17330 WP_046127165.1 3732647..3735469(+) (uvrA) [Vibrio cholerae strain 10432-62]
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD
GEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANLSLAQGAIRGWDQKNFYYFQML
TALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKYINDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYI
SNKPCSSCDGTRLKIEARNVFINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNTVLVVEHDEDAIRMADHVIDIG
PGAGVHGGMVVAEGNVQEIIANPNSLTGQYLSGVKKIAVPTERTPRDKSKTVELKGAVGNNLKNVDLSIPIGLFTCVTGV
SGSGKSTLINDTFFKIAHTALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLDMTVEDAREFFD
PVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN

Nucleotide

• Length: 2823 bp

>NTDB_id=124555 VAB027_RS17330 WP_046127165.1 3732647..3735469(+) (uvrA) [Vibrio cholerae strain 10432-62]
ATGGACAAAATCGAAGTACGCGGCGCTCGTACCCATAACCTCAAAAATATCAATCTGACCATTCCTCGTGACAAATTGAT
TGTCATCACCGGCCTCTCTGGTTCAGGTAAATCCTCACTGGCTTTTGATACGCTGTACGCAGAAGGTCAACGGCGTTATG
TCGAATCACTCTCGGCTTATGCGCGCCAATTCCTTTCTCTGATGGAAAAGCCGGATGTAGACCATATTGAGGGGCTTTCA
CCCGCGATTTCGATTGAGCAGAAGTCCACTTCCCATAACCCACGCTCTACCGTGGGTACAATTACGGAAGTGTATGACTA
TTTACGTCTACTCTACGCTCGGGTTGGTGAGCCACGCTGCCCTGAACACCAAGTGCCACTGAAAGCGCAAACCATCAGTC
AGATGGTAGACAAAGTACTGGAATTGCCAGAAGGCAGCAAAATGATGCTGCTGGCAACCATAGTCAAAGAGCGCAAAGGC
GAACACGTTAAAACATTGGAAAACCTTGCTGCGCAGGGCTTTATTCGTGCGCGTATCGATGGTGAAACCTGCGATCTGAC
CGATCCACCGAAACTCGAACTGCACAAAAAGCATACCATTGAAGTGATTGTCGACCGTTTCAAAGTGCGCAGTGATCTGC
AGCAACGCTTAGCCGAATCCTTTGAAACCGCCTTAGAACTTTCCGGCGGTATCGTCGTTGTCGCACCGATGGAAGGTGAT
GGCGAAGAGCAGATTTTCTCGGCTAACTTTGCTTGTCCACATTGCGGTTACAGCATGCGCGAGCTTGAACCACGCCTGTT
CTCCTTCAACAACCCAGCCGGTGCTTGTCCAACCTGTGATGGTTTAGGAGTACAACAGTATTTCGATCCAGATCGAGTGA
TTCAAGATGCCAATTTAAGTTTGGCACAAGGCGCAATCCGCGGTTGGGATCAAAAGAACTTTTATTATTTCCAGATGCTG
ACTGCACTGGCCGAGCACTACGATTTTGATGTACACACGCCCTTCAATAAGCTGAGCAAAAAGATTCAGGAAATCATTCT
GCACGGCTCTGGTCGCACCGAAATTGAATTTAAGTACATCAATGATCGGGGTGATATTCGCCTTAAAAAACATCCTTTTG
AAGGAATTTTGCATAATTTGGAGCGCCGCTATCGCGATACCGAATCTAACTCGGTGCGTGAGGAGCTGGCCAAATACATC
TCCAACAAGCCTTGCAGCAGTTGTGATGGTACGCGCTTAAAAATCGAAGCGCGCAATGTGTTTATTAATGATACTGCGCT
GCCAACGATTGTAGAACTGAGCATTGCCGATGCGCTAACGTTCTTCCAAGAGCTCAAACTGGAAGGCCAACGTGCACAAA
TCGCTGAAAAAGTGATGAAAGAGATTAATGACCGGCTGCAATTTTTGGTCAATGTCGGGCTCAATTACTTAAATCTCTCG
CGCAGCGCCGAGACGCTTTCCGGTGGCGAAGCACAGCGTATTCGCCTAGCCAGTCAGATTGGTGCCGGTTTAGTCGGTGT
GATGTATGTCCTTGATGAACCCTCGATTGGCCTCCACCAACGGGACAACGAACGCTTGCTGCAAACCCTCACCCACTTAC
GCAATCTAGGTAATACCGTGTTGGTGGTTGAGCATGATGAAGATGCGATTCGCATGGCAGATCATGTGATTGATATTGGC
CCAGGTGCTGGCGTACACGGCGGCATGGTGGTTGCCGAAGGCAATGTGCAGGAAATCATCGCCAATCCAAACTCACTCAC
AGGTCAATATCTCAGTGGCGTGAAAAAAATTGCCGTACCAACTGAACGAACGCCACGCGATAAGAGCAAAACCGTTGAAC
TGAAAGGCGCGGTAGGGAATAACCTGAAGAATGTCGATTTGTCGATCCCTATCGGTCTGTTTACCTGTGTGACGGGCGTT
TCAGGTTCGGGAAAATCCACTCTGATCAACGATACCTTCTTTAAGATTGCCCATACCGCACTCAATGGCGCGACGACGGC
GACACCTGCTCCTTATCGCTCCATTCAAGGTCTAGAACACTTTGATAAAGTGATCGATATCGATCAGAGCCCAATTGGTC
GCACTCCTCGCTCCAACCCTGCCACTTACACCGGAATCTTCACTCCAATCCGTGAATTGTTTGCAGGAACACAAGAGTCT
CGCTCGCGTGGTTATCAGCCGGGACGCTTTAGTTTTAACGTCCGCGGAGGGCGCTGTGAAGCGTGCCAAGGCGATGGCGT
GATCAAAGTTGAAATGCACTTCTTACCCGATGTGTATGTGCCTTGTGATGTGTGTAAAGGTAAACGCTATAACCGAGAAA
CACTGGAAGTGCGCTACAAAGGCAAGACGATTGATGAAGTTTTGGACATGACCGTTGAAGACGCACGCGAGTTTTTTGAC
CCCGTACCTGTGATAGCACGTAAGCTGCAAACCTTGATGGATGTTGGATTGTCCTACATTCGTCTTGGGCAATCAGCCAC
CACCTTATCAGGAGGTGAAGCGCAGCGGGTAAAATTAGCGCGTGAACTCTCCAAACGAGATACGGGCAAAACCCTGTATA
TTTTGGATGAACCAACCACGGGCCTACACTTCCACGATATTCAGCAATTATTGAGCGTTCTTCACCGCTTGCGTGACCAT
GGCAATACCGTGGTGGTGATTGAGCATAATTTGGATGTGATCAAAACGGCTGACTGGATCATCGATTTAGGCCCGGAAGG
CGGCCAAGGCGGCGGACTGATTATTGCAGAAGGAACACCAGAAGATGTGGCGCAGATCGAAGCTTCACATACCGCACGTT
TCCTCAAGCCTTTGTTGAATTAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-236)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• ABC transporter (ABC_tran) (622-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.9	100	0.581
uvrA	Streptococcus pneumoniae TIGR4	57.9	100	0.581
uvrA	Streptococcus pneumoniae D39	57.9	100	0.581