Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | ABA1_RS15740 | Genome accession | NZ_CP010781 |
| Coordinates | 3307940..3308455 (+) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain A1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3302940..3313455
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABA1_RS15720 (ABA1_03155) | - | 3303271..3304731 (+) | 1461 | WP_000004974.1 | amino acid permease | - |
| ABA1_RS15725 (ABA1_03156) | - | 3305009..3306214 (+) | 1206 | WP_000512708.1 | RtcB family protein | - |
| ABA1_RS19545 (ABA1_03157) | - | 3306218..3306376 (+) | 159 | WP_000692859.1 | hypothetical protein | - |
| ABA1_RS15735 (ABA1_03158) | omp38 | 3306499..3307560 (-) | 1062 | WP_000777885.1 | outer membrane protein Omp38 | - |
| ABA1_RS15740 (ABA1_03159) | fimT | 3307940..3308455 (+) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| ABA1_RS15745 (ABA1_03160) | - | 3308564..3309739 (+) | 1176 | WP_000129968.1 | thiolase family protein | - |
| ABA1_RS15750 (ABA1_03161) | - | 3309866..3310309 (+) | 444 | WP_001176585.1 | VOC family protein | - |
| ABA1_RS15755 (ABA1_03162) | - | 3310352..3310705 (-) | 354 | WP_000457783.1 | DMT family transporter | - |
| ABA1_RS15760 (ABA1_03163) | - | 3310788..3311273 (-) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| ABA1_RS15765 (ABA1_03164) | - | 3311266..3312909 (-) | 1644 | WP_000281764.1 | nitrite/sulfite reductase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=124348 ABA1_RS15740 WP_000477151.1 3307940..3308455(+) (fimT) [Acinetobacter baumannii strain A1]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=124348 ABA1_RS15740 WP_000477151.1 3307940..3308455(+) (fimT) [Acinetobacter baumannii strain A1]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAT
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAT
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |