Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   MTVDSCJ20_RS07045 Genome accession   NZ_CP008787
Coordinates   1370555..1371739 (-) Length   394 a.a.
NCBI ID   WP_014517095.1    Uniprot ID   A0A0E1EUG9
Organism   Campylobacter jejuni subsp. jejuni strain MTVDSCj20     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1365555..1376739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTVDSCJ20_RS07020 (MTVDSCj20_1384) fliL 1366703..1367239 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  MTVDSCJ20_RS07025 (MTVDSCj20_1385) acpS 1367239..1367586 (+) 348 WP_002825806.1 holo-ACP synthase -
  MTVDSCJ20_RS07030 (MTVDSCj20_1386) - 1367587..1368006 (-) 420 WP_002880391.1 hypothetical protein -
  MTVDSCJ20_RS07035 (MTVDSCj20_1387) - 1368003..1369364 (-) 1362 WP_014517093.1 cytochrome P450 -
  MTVDSCJ20_RS07040 (MTVDSCj20_1388) - 1369361..1370482 (-) 1122 WP_014517094.1 membrane protein -
  MTVDSCJ20_RS07045 (MTVDSCj20_1389) kpsS 1370555..1371739 (-) 1185 WP_014517095.1 capsule polysaccharide modification protein KpsS Regulator
  MTVDSCJ20_RS07050 (MTVDSCj20_1390) - 1371736..1372833 (-) 1098 Protein_1364 capsular polysaccharide biosynthesis protein -
  MTVDSCJ20_RS07060 (MTVDSCj20_1392) - 1373054..1373545 (-) 492 WP_014517098.1 hypothetical protein -
  MTVDSCJ20_RS07065 (MTVDSCj20_1393) - 1373698..1374070 (-) 373 Protein_1366 alpha-2,3-sialyltransferase -
  MTVDSCJ20_RS08765 - 1374243..1374383 (-) 141 WP_153610262.1 hypothetical protein -
  MTVDSCJ20_RS07070 (MTVDSCj20_1395) - 1375083..1376369 (+) 1287 WP_014517100.1 FAD-dependent oxidoreductase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46775.47 Da        Isoelectric Point: 9.8987

>NTDB_id=124257 MTVDSCJ20_RS07045 WP_014517095.1 1370555..1371739(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain MTVDSCj20]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLSMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYKDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEVWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQSIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=124257 MTVDSCJ20_RS07045 WP_014517095.1 1370555..1371739(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain MTVDSCj20]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTTCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACAAGGTGTAAATGTGATGAAAAAGATCTTGAAAATTTCTATAAAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAGT
ATGGATTTTTGAGGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAGTATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGTAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAATCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAACGATTTAAGTCAAAAATATCATGTAG
AGGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTGTGTAATTTTAAGA
AATATCTTTTACAAACTAACCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E1EUG9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.462

100

0.975


Multiple sequence alignment