Detailed information NTG0124250

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: MTVDSCJ20_RS05860
• Genome accession: NZ_CP008787
• Coordinates: 1128391..1129341 (+)
• Length: 316 a.a.
• NCBI ID: WP_002866164.1
• Uniprot ID: Q9ALT6
• Organism: Campylobacter jejuni subsp. jejuni strain MTVDSCj20
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1123391..1134341

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTVDSCJ20_RS05835 (MTVDSCj20_1148)	-	1123740..1124762 (-)	1023	WP_002891861.1	hypothetical protein	-
MTVDSCJ20_RS05840 (MTVDSCj20_1149)	-	1124833..1125606 (+)	774	WP_002891857.1	glycosyltransferase family 25 protein	-
MTVDSCJ20_RS05845 (MTVDSCj20_1150)	wlaTB	1125599..1126555 (+)	957	WP_002891855.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
MTVDSCJ20_RS05850 (MTVDSCj20_1151)	wlaTC	1126552..1127511 (+)	960	WP_002891853.1	class E lipooligosaccharide biosynthesis protein WlaTC	-
MTVDSCJ20_RS05855 (MTVDSCj20_1152)	-	1127514..1128332 (-)	819	WP_038402152.1	glycosyltransferase family 2 protein	-
MTVDSCJ20_RS05860 (MTVDSCj20_1153)	waaF	1128391..1129341 (+)	951	WP_002866164.1	lipopolysaccharide heptosyltransferase II	Regulator
MTVDSCJ20_RS05865 (MTVDSCj20_1154)	-	1129393..1130892 (+)	1500	WP_002877116.1	MBOAT family O-acyltransferase	-
MTVDSCJ20_RS05870 (MTVDSCj20_1155)	-	1131040..1132017 (+)	978	WP_002866168.1	hypothetical protein	-
MTVDSCJ20_RS05875 (MTVDSCj20_1156)	gmhA	1132021..1132581 (-)	561	WP_002877119.1	D-sedoheptulose 7-phosphate isomerase	-
MTVDSCJ20_RS05880 (MTVDSCj20_1157)	rfaE1	1132578..1133963 (-)	1386	WP_014517065.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36378.95 Da
• Isoelectric Point: 10.3102

>NTDB_id=124250 MTVDSCJ20_RS05860 WP_002866164.1 1128391..1129341(+) (waaF) [Campylobacter jejuni subsp. jejuni strain MTVDSCj20]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNTQFILYGSLVSTALFREFPNSKIIIENKQTRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP

Nucleotide

• Length: 951 bp

>NTDB_id=124250 MTVDSCJ20_RS05860 WP_002866164.1 1128391..1129341(+) (waaF) [Campylobacter jejuni subsp. jejuni strain MTVDSCj20]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATACCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTACGGTTTATAAGATAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAGC
ACCATAAATGCATGAAAGATCTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACTCCATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q9ALT6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.249	99.051	0.934