Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | MTVDSCJ20_RS05500 | Genome accession | NZ_CP008787 |
| Coordinates | 1058188..1058490 (+) | Length | 100 a.a. |
| NCBI ID | WP_002877750.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni subsp. jejuni strain MTVDSCj20 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1053188..1063490
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MTVDSCJ20_RS05475 (MTVDSCj20_1076) | rpsR | 1053550..1053810 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| MTVDSCJ20_RS05480 (MTVDSCj20_1077) | lon | 1053871..1056246 (-) | 2376 | WP_038402136.1 | endopeptidase La | - |
| MTVDSCJ20_RS05485 (MTVDSCj20_1078) | - | 1056263..1056910 (-) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| MTVDSCJ20_RS05490 (MTVDSCj20_1079) | fliW | 1057071..1057460 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| MTVDSCJ20_RS05495 (MTVDSCj20_1080) | proC | 1057460..1058191 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| MTVDSCJ20_RS05500 (MTVDSCj20_1081) | ctsT | 1058188..1058490 (+) | 303 | WP_002877750.1 | hypothetical protein | Machinery gene |
| MTVDSCJ20_RS05505 (MTVDSCj20_1082) | - | 1058487..1059149 (+) | 663 | WP_002877751.1 | hypothetical protein | - |
| MTVDSCJ20_RS05510 (MTVDSCj20_1083) | - | 1059146..1059598 (+) | 453 | WP_002877757.1 | hypothetical protein | - |
| MTVDSCJ20_RS05515 (MTVDSCj20_1084) | hemD | 1059595..1060224 (-) | 630 | WP_002877758.1 | uroporphyrinogen-III synthase | - |
| MTVDSCJ20_RS05520 (MTVDSCj20_1085) | thiE | 1060202..1060834 (-) | 633 | WP_002877759.1 | thiamine phosphate synthase | - |
| MTVDSCJ20_RS05525 (MTVDSCj20_1086) | thiD | 1060824..1061636 (-) | 813 | WP_002877760.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| MTVDSCJ20_RS05530 (MTVDSCj20_1087) | - | 1061633..1062319 (-) | 687 | WP_002866108.1 | endonuclease III domain-containing protein | - |
| MTVDSCJ20_RS05535 (MTVDSCj20_1088) | - | 1062316..1063077 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12138.20 Da Isoelectric Point: 7.0039
>NTDB_id=124248 MTVDSCJ20_RS05500 WP_002877750.1 1058188..1058490(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain MTVDSCj20]
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=124248 MTVDSCJ20_RS05500 WP_002877750.1 1058188..1058490(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain MTVDSCj20]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |