Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SP5448_RS01705 | Genome accession | NZ_CP008776 |
| Coordinates | 323722..324213 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain 5448 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 318722..329213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SP5448_RS01675 (SP5448_01745) | - | 320012..320512 (+) | 501 | WP_015055998.1 | phosphatase PAP2 family protein | - |
| SP5448_RS01680 (SP5448_01750) | trxA | 320575..320907 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| SP5448_RS01685 (SP5448_01755) | - | 320959..321546 (-) | 588 | WP_010922631.1 | helix-turn-helix transcriptional regulator | - |
| SP5448_RS01690 (SP5448_01760) | mutY | 321622..322776 (-) | 1155 | WP_015055997.1 | A/G-specific adenine glycosylase | - |
| SP5448_RS01695 (SP5448_01765) | - | 322944..323237 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| SP5448_RS01700 (SP5448_01770) | rpsF | 323410..323700 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| SP5448_RS01705 (SP5448_01775) | ssb | 323722..324213 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| SP5448_RS01710 (SP5448_01780) | rpsR | 324378..324617 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| SP5448_RS01715 (SP5448_01785) | - | 324750..325406 (-) | 657 | WP_010922629.1 | DUF1129 domain-containing protein | - |
| SP5448_RS01720 (SP5448_01790) | - | 325539..326483 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=124129 SP5448_RS01705 WP_002983122.1 323722..324213(+) (ssb) [Streptococcus pyogenes strain 5448]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=124129 SP5448_RS01705 WP_002983122.1 323722..324213(+) (ssb) [Streptococcus pyogenes strain 5448]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |