Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   BSUB_RS17220 Genome accession   NZ_CP008698
Coordinates   3234046..3234945 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis subsp. subtilis str. AG1839     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3229046..3239945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSUB_RS17185 (BSUB_03383) mrpE 3229286..3229762 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  BSUB_RS17190 (BSUB_03384) mrpF 3229762..3230046 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  BSUB_RS17195 (BSUB_03385) mnhG 3230030..3230404 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  BSUB_RS17200 (BSUB_03386) yuxO 3230443..3230823 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  BSUB_RS17205 (BSUB_03387) comA 3230842..3231486 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  BSUB_RS17210 (BSUB_03388) comP 3231567..3233876 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  BSUB_RS17215 (BSUB_03389) comX 3233891..3234058 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  BSUB_RS17220 (BSUB_03390) comQ 3234046..3234945 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  BSUB_RS17225 (BSUB_03391) degQ 3235130..3235270 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  BSUB_RS22975 - 3235492..3235617 (+) 126 WP_003228793.1 hypothetical protein -
  BSUB_RS17230 (BSUB_03392) - 3235731..3236099 (+) 369 WP_003243784.1 hypothetical protein -
  BSUB_RS17235 (BSUB_03393) pdeH 3236075..3237304 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  BSUB_RS17240 (BSUB_03394) pncB 3237441..3238913 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  BSUB_RS17245 (BSUB_03395) pncA 3238929..3239480 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=123732 BSUB_RS17220 WP_003243039.1 3234046..3234945(-) (comQ) [Bacillus subtilis subsp. subtilis str. AG1839]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=123732 BSUB_RS17220 WP_003243039.1 3234046..3234945(-) (comQ) [Bacillus subtilis subsp. subtilis str. AG1839]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment