Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FE90_RS09080 Genome accession   NZ_CP008695
Coordinates   1810630..1811343 (-) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain M23ND     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1805630..1816343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FE90_RS10035 (FE90_1830) - 1805800..1805946 (+) 147 WP_164976447.1 hypothetical protein -
  FE90_RS09050 (FE90_1831) - 1805975..1806910 (+) 936 WP_038433762.1 Gfo/Idh/MocA family protein -
  FE90_RS09055 (FE90_1832) - 1806919..1807428 (+) 510 WP_038433763.1 GNAT family N-acetyltransferase -
  FE90_RS09060 (FE90_1833) nrdG 1807428..1808042 (+) 615 WP_038433764.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  FE90_RS09065 (FE90_1834) yaaA 1808216..1808947 (-) 732 WP_011889219.1 peroxide stress protein YaaA -
  FE90_RS09070 (FE90_1835) - 1808989..1809846 (-) 858 WP_038433765.1 VOC family protein -
  FE90_RS09075 (FE90_1836) - 1810032..1810351 (+) 320 Protein_1791 winged helix-turn-helix transcriptional regulator -
  FE90_RS09080 (FE90_1839) treR 1810630..1811343 (-) 714 WP_002982243.1 trehalose operon repressor Regulator
  FE90_RS09085 (FE90_1840) treP 1811554..1813578 (+) 2025 WP_038433766.1 PTS system trehalose-specific EIIBC component -
  FE90_RS09090 (FE90_1841) treC 1813645..1815273 (+) 1629 WP_038433767.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=123610 FE90_RS09080 WP_002982243.1 1810630..1811343(-) (treR) [Streptococcus pyogenes strain M23ND]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=123610 FE90_RS09080 WP_002982243.1 1810630..1811343(-) (treR) [Streptococcus pyogenes strain M23ND]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment