Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FE90_RS05605 Genome accession   NZ_CP008695
Coordinates   1081256..1081981 (-) Length   241 a.a.
NCBI ID   WP_038433541.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M23ND     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1076256..1086981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FE90_RS05570 (FE90_1113) rnpM 1076290..1076586 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  FE90_RS05575 (FE90_1114) nusA 1076602..1077759 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  FE90_RS05580 (FE90_1115) rimP 1077934..1078470 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  FE90_RS05590 (FE90_1116) trmB 1078729..1079364 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FE90_RS05595 (FE90_1117) ccrZ 1079364..1080155 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  FE90_RS05600 (FE90_1118) - 1080219..1081253 (-) 1035 WP_002983381.1 ABC transporter permease -
  FE90_RS05605 (FE90_1119) pptA 1081256..1081981 (-) 726 WP_038433541.1 ABC transporter ATP-binding protein Regulator
  FE90_RS05610 (FE90_1120) - 1082053..1082472 (+) 420 WP_002983376.1 HIT family protein -
  FE90_RS05615 (FE90_1121) - 1082469..1082825 (+) 357 WP_002988657.1 hypothetical protein -
  FE90_RS05620 (FE90_1122) brpA 1082936..1084219 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  FE90_RS05625 (FE90_1123) - 1084228..1084752 (-) 525 WP_038433542.1 GNAT family N-acetyltransferase -
  FE90_RS05630 (FE90_1124) tsaE 1084727..1085188 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FE90_RS05635 (FE90_1125) - 1085342..1086802 (-) 1461 WP_038433543.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26677.76 Da        Isoelectric Point: 4.6316

>NTDB_id=123587 FE90_RS05605 WP_038433541.1 1081256..1081981(-) (pptA) [Streptococcus pyogenes strain M23ND]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDINLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=123587 FE90_RS05605 WP_038433541.1 1081256..1081981(-) (pptA) [Streptococcus pyogenes strain M23ND]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCTTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCAACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.385

99.17

0.718
  pptA Streptococcus thermophilus LMD-9

71.548

99.17

0.71

Multiple sequence alignment