Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   BRLA_RS08280 Genome accession   NZ_CP007806
Coordinates   1769837..1771561 (+) Length   574 a.a.
NCBI ID   WP_003337876.1    Uniprot ID   A0A075R3F1
Organism   Brevibacillus laterosporus LMG 15441     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1764837..1776561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BRLA_RS08255 (BRLA_c016870) dxs 1765050..1766936 (+) 1887 WP_003337881.1 1-deoxy-D-xylulose-5-phosphate synthase -
  BRLA_RS08260 (BRLA_c016880) - 1766945..1767772 (+) 828 WP_003337880.1 TlyA family RNA methyltransferase -
  BRLA_RS08265 (BRLA_c016890) - 1767957..1768259 (+) 303 WP_236867805.1 hypothetical protein -
  BRLA_RS08270 (BRLA_c016900) - 1768513..1769370 (+) 858 WP_003337878.1 NAD(+)/NADH kinase -
  BRLA_RS08275 (BRLA_c016910) argR 1769375..1769824 (+) 450 WP_003337877.1 transcriptional regulator ArgR -
  BRLA_RS08280 (BRLA_c016920) recN 1769837..1771561 (+) 1725 WP_003337876.1 DNA repair protein RecN Machinery gene
  BRLA_RS08285 (BRLA_c016930) spoIVB 1771671..1772996 (+) 1326 WP_003337875.1 SpoIVB peptidase -
  BRLA_RS08290 (BRLA_c016940) spo0A 1773286..1774068 (+) 783 WP_003337874.1 sporulation transcription factor Spo0A -
  BRLA_RS08295 (BRLA_c016950) - 1774730..1774915 (-) 186 WP_003337873.1 hypothetical protein -
  BRLA_RS08300 (BRLA_c016960) - 1775203..1776183 (+) 981 WP_003337872.1 HRDC domain-containing protein -

Sequence

Protein


Download         Length: 574 a.a.        Molecular weight: 64901.00 Da        Isoelectric Point: 5.1540

>NTDB_id=123519 BRLA_RS08280 WP_003337876.1 1769837..1771561(+) (recN) [Brevibacillus laterosporus LMG 15441]
MIHELTIRNFAIIKHTTISFGHGLNILTGETGAGKSIIIDALGQLLGDRSSAELIRYGEKRAEIEGLFECKPGHPAYAVC
ESFGIQVDPDGILVVRRDISSTGKSIIRVNGQLITLAMLRELGPWLVNVHGQHDHQALMQSDKHIRWLDAYGESRLAETK
QEFSHLYQKYRKAVQDLSRMAKNERELMQRIDLLSYQLNEIEAAKLIPGEDEKLIQQRKKWANIEKIFAGVQDAYMSLYG
DQRGQDWLGHAMGELERVQQYDEQLVPIVETIQSAYYQVEDTVQQLRHIKDRLDFDPAILAEVEGRLDQLSGLKRKYGKS
VDEILEYAAGIQDELDEIQHYDDRLQQMEKTLREAEADVAIEALELSTLRRELAVELANLIEHELKELHMERARFAIEIK
HIPDERGIEVEGNRVRVSSRGIDEIEFLIAPNPGEPLRPLTKIASGGELSRVMLAIKSILATTEQVGTLIFDEVDTGVSG
RAAQAIAEKLARVAKHRQVLCITHLPQVASMADAHFYIQKQMDEQETSTTVVLMSSEERVNELARMLGGAEVTEKTKEHA
KEMILLGEERKAVN

Nucleotide


Download         Length: 1725 bp        

>NTDB_id=123519 BRLA_RS08280 WP_003337876.1 1769837..1771561(+) (recN) [Brevibacillus laterosporus LMG 15441]
ATGATCCACGAACTAACCATCCGCAATTTTGCGATTATCAAACACACCACGATCTCTTTTGGGCATGGGCTTAATATCCT
GACAGGAGAGACAGGGGCAGGTAAATCCATTATTATCGATGCGCTAGGGCAATTGCTCGGTGATCGCAGTTCAGCAGAGC
TTATCCGTTACGGAGAAAAACGGGCAGAGATAGAAGGTCTGTTCGAATGTAAGCCAGGGCACCCCGCTTACGCCGTCTGT
GAAAGCTTCGGCATTCAGGTTGACCCGGATGGTATCCTGGTTGTACGTCGGGATATTTCCTCTACGGGTAAAAGCATCAT
TCGCGTTAATGGCCAGCTAATTACGTTAGCCATGTTACGAGAATTAGGACCGTGGCTGGTAAACGTTCACGGTCAGCATG
ATCATCAGGCGCTTATGCAATCAGATAAGCATATTCGCTGGCTCGATGCTTATGGAGAATCTCGCTTGGCTGAAACAAAG
CAGGAATTTAGTCATTTATATCAAAAATATCGCAAAGCCGTGCAGGATTTATCAAGAATGGCTAAAAACGAGCGCGAATT
AATGCAGCGCATTGACCTATTAAGCTATCAGTTAAATGAAATTGAAGCGGCAAAATTAATCCCTGGTGAAGACGAGAAGC
TCATACAGCAACGTAAGAAGTGGGCTAATATTGAAAAAATATTTGCTGGTGTACAGGATGCTTACATGTCCCTTTATGGA
GATCAGAGGGGACAAGATTGGCTTGGGCACGCTATGGGAGAATTGGAGCGGGTACAACAATATGATGAACAGCTAGTTCC
GATTGTAGAAACGATTCAAAGTGCCTATTATCAGGTAGAGGACACTGTTCAACAATTGCGTCATATAAAGGACCGTTTGG
ATTTTGATCCTGCTATCCTAGCTGAAGTAGAAGGCAGATTAGACCAATTATCTGGATTAAAGCGCAAGTATGGTAAGTCC
GTAGATGAGATTTTGGAATATGCAGCAGGTATACAGGATGAACTAGATGAAATCCAGCATTATGATGATCGTTTGCAACA
AATGGAAAAAACACTCCGTGAAGCCGAAGCTGATGTAGCTATTGAGGCGCTGGAATTAAGTACGCTCCGCCGTGAGTTAG
CAGTAGAGCTTGCTAACTTAATTGAGCATGAGCTAAAAGAATTGCATATGGAACGAGCACGTTTTGCAATTGAGATTAAG
CATATTCCAGACGAGCGAGGTATTGAGGTTGAGGGGAATCGAGTTAGGGTGAGTTCTCGCGGGATTGATGAGATAGAATT
TTTGATTGCGCCGAACCCAGGTGAACCTCTGCGCCCCTTAACTAAGATTGCGTCTGGAGGGGAATTATCCCGTGTCATGC
TCGCGATTAAAAGCATACTAGCTACTACCGAGCAGGTGGGTACTCTGATCTTTGACGAGGTAGATACGGGTGTAAGCGGT
CGAGCTGCTCAAGCTATTGCGGAAAAATTGGCACGAGTAGCGAAACATCGTCAAGTGCTATGTATTACGCATTTACCGCA
AGTAGCTTCTATGGCGGATGCCCATTTTTATATTCAAAAGCAGATGGATGAACAGGAGACCAGCACAACGGTTGTCCTCA
TGTCTTCGGAAGAGCGTGTGAACGAGCTTGCTCGTATGCTTGGCGGAGCTGAAGTTACAGAGAAAACAAAAGAACATGCT
AAGGAAATGATTCTCCTTGGAGAAGAGCGGAAAGCTGTCAATTGA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-523)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A075R3F1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.677

98.78

0.481

Multiple sequence alignment