Detailed information    

insolico Bioinformatically predicted

Overview

Name   comN   Type   Machinery gene
Locus tag   H733_RS07610 Genome accession   NZ_CP007805
Coordinates   1577206..1577718 (-) Length   170 a.a.
NCBI ID   WP_005651545.1    Uniprot ID   A0A0H3PJN2
Organism   Haemophilus influenzae CGSHiCZ412602     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1572206..1582718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H733_RS07595 (H733_1495) comQ 1575527..1575814 (-) 288 WP_038440111.1 DUF5374 domain-containing protein Machinery gene
  H733_RS07600 (H733_1496) comP 1575807..1576490 (-) 684 WP_038440112.1 DUF2572 family protein Machinery gene
  H733_RS07605 (H733_1497) comO 1576490..1577206 (-) 717 WP_038440113.1 type II secretion system protein J Machinery gene
  H733_RS07610 (H733_1498) comN 1577206..1577718 (-) 513 WP_005651545.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  H733_RS07615 (H733_1499) suhB 1577918..1578721 (+) 804 WP_005664157.1 inositol-1-monophosphatase -
  H733_RS07620 (H733_1500) nrfE 1578831..1580738 (+) 1908 WP_038440263.1 heme lyase NrfEFG subunit NrfE -
  H733_RS07625 (H733_1501) - 1580738..1581268 (+) 531 WP_038440114.1 DsbE family thiol:disulfide interchange protein -
  H733_RS07630 (H733_1502) nrfF 1581265..1582419 (+) 1155 WP_038440115.1 heme lyase NrfEFG subunit NrfF -

Sequence

Protein


Download         Length: 170 a.a.        Molecular weight: 19877.15 Da        Isoelectric Point: 8.9743

>NTDB_id=123504 H733_RS07610 WP_005651545.1 1577206..1577718(-) (comN) [Haemophilus influenzae CGSHiCZ412602]
MQKGMTLVELLIGLAIISIVLNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN

Nucleotide


Download         Length: 513 bp        

>NTDB_id=123504 H733_RS07610 WP_005651545.1 1577206..1577718(-) (comN) [Haemophilus influenzae CGSHiCZ412602]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGTGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAAGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-21)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3PJN2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comN Haemophilus influenzae Rd KW20

98.824

100

0.988

Multiple sequence alignment