Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   H733_RS02870 Genome accession   NZ_CP007805
Coordinates   576714..577010 (-) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae CGSHiCZ412602     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 571714..582010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H733_RS02845 (H733_0544) - 571914..572477 (-) 564 WP_038439521.1 DNA-3-methyladenine glycosylase I -
  H733_RS02850 (H733_0546) aroE 572691..573497 (-) 807 WP_038439522.1 shikimate dehydrogenase -
  H733_RS02855 (H733_0547) - 573501..574052 (-) 552 WP_038439523.1 Sua5/YciO/YrdC/YwlC family protein -
  H733_RS02860 (H733_0548) - 574068..574604 (-) 537 WP_038439524.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  H733_RS02865 (H733_0549) - 574614..576530 (-) 1917 WP_038439525.1 ABC transporter ATP-binding protein -
  H733_RS02870 (H733_0550) HI0659 576714..577010 (-) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  H733_RS02875 (H733_0551) - 577003..577224 (-) 222 WP_038439526.1 type II toxin-antitoxin system RelE/ParE family toxin -
  H733_RS02880 (H733_0552) - 577331..580366 (-) 3036 WP_038439528.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=123490 H733_RS02870 WP_005650837.1 576714..577010(-) (HI0659) [Haemophilus influenzae CGSHiCZ412602]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=123490 H733_RS02870 WP_005650837.1 576714..577010(-) (HI0659) [Haemophilus influenzae CGSHiCZ412602]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGCGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAACTTGAAACGTTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1

Multiple sequence alignment