Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | ECOLIN_RS05040 | Genome accession | NZ_CP007799 |
| Coordinates | 1037602..1038231 (+) | Length | 209 a.a. |
| NCBI ID | WP_000839136.1 | Uniprot ID | A0A0D8W3X3 |
| Organism | Escherichia coli Nissle 1917 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1032602..1043231
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECOLIN_RS05015 (ECOLIN_04895) | ycbZ | 1032990..1034750 (-) | 1761 | WP_000156504.1 | Lon protease family protein | - |
| ECOLIN_RS05020 (ECOLIN_04900) | matP | 1034936..1035388 (+) | 453 | WP_000877153.1 | macrodomain Ter protein MatP | - |
| ECOLIN_RS05025 (ECOLIN_04905) | ompA | 1035466..1036518 (-) | 1053 | WP_001528868.1 | porin OmpA | - |
| ECOLIN_RS05035 (ECOLIN_04910) | sulA | 1036874..1037383 (-) | 510 | WP_000288707.1 | SOS-induced cell division inhibitor SulA | - |
| ECOLIN_RS05040 (ECOLIN_04915) | sxy/tfoX | 1037602..1038231 (+) | 630 | WP_000839136.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| ECOLIN_RS05045 (ECOLIN_04920) | yccS | 1038194..1040356 (-) | 2163 | WP_000875041.1 | YccS family putative transporter | - |
| ECOLIN_RS05050 (ECOLIN_04925) | yccF | 1040366..1040812 (-) | 447 | WP_001261236.1 | YccF domain-containing protein | - |
| ECOLIN_RS05055 (ECOLIN_04930) | helD | 1040935..1042989 (+) | 2055 | WP_001443200.1 | DNA helicase IV | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24128.06 Da Isoelectric Point: 9.2180
>NTDB_id=123346 ECOLIN_RS05040 WP_000839136.1 1037602..1038231(+) (sxy/tfoX) [Escherichia coli Nissle 1917]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=123346 ECOLIN_RS05040 WP_000839136.1 1037602..1038231(+) (sxy/tfoX) [Escherichia coli Nissle 1917]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTAACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTAACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.043 |
100 |
0.99 |