Detailed information NTG0123287

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: UPTC4110_RS01565
• Genome accession: NZ_CP007776
• Coordinates: 281540..282718 (+)
• Length: 392 a.a.
• NCBI ID: WP_039627951.1
• Uniprot ID: -
• Organism: Campylobacter lari CCUG 22395
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 276540..287718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC4110_RS01545 (UPTC4110_0310)	-	277241..277882 (+)	642	WP_039627944.1	CMP-N-acetylneuraminic acid synthetase	-
UPTC4110_RS01550 (UPTC4110_0311)	-	277894..278883 (+)	990	WP_039627946.1	4-hydroxy-2-oxovalerate aldolase-like protein	-
UPTC4110_RS01555 (UPTC4110_0312)	-	278873..279514 (+)	642	WP_039627948.1	HAD hydrolase-like protein	-
UPTC4110_RS01560 (UPTC4110_0313)	-	279516..281543 (+)	2028	WP_039627950.1	capsular polysaccharide export protein	-
UPTC4110_RS01565 (UPTC4110_0314)	kpsS	281540..282718 (+)	1179	WP_039627951.1	capsular polysaccharide export protein	Regulator
UPTC4110_RS07980 (UPTC4110_0315)	-	282715..284223 (-)	1509	WP_039627952.1	hypothetical protein	-
UPTC4110_RS01575 (UPTC4110_0316)	-	284385..285515 (+)	1131	WP_039627954.1	hypothetical protein	-
UPTC4110_RS01580 (UPTC4110_0317)	-	285525..286897 (+)	1373	Protein_314	cytochrome P450	-
UPTC4110_RS01585 (UPTC4110_0318)	-	286894..287247 (+)	354	WP_039627957.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46343.89 Da
• Isoelectric Point: 10.1677

>NTDB_id=123287 UPTC4110_RS01565 WP_039627951.1 281540..282718(+) (kpsS) [Campylobacter lari CCUG 22395]
MNLSKKLKNFSGKNVLLLQGPVGGFFRKIATKIPQAKVYKVNFNGGDFFFYPFKSINYTKSLAKLEDFYKKLFEEKQIQV
VIMYNDCRKVHEIAINVAKQMGIEIWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFKNM
AFASFLYWLFAFLFSWYFNNSLHHRSLKLFDFLPWLCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide

• Length: 1179 bp

>NTDB_id=123287 UPTC4110_RS01565 WP_039627951.1 281540..282718(+) (kpsS) [Campylobacter lari CCUG 22395]
ATGAATTTAAGTAAGAAGTTAAAAAATTTTTCTGGTAAAAATGTTTTATTACTCCAAGGACCTGTGGGTGGATTTTTTCG
TAAAATTGCTACAAAAATTCCACAAGCTAAGGTTTATAAAGTAAATTTTAATGGTGGAGATTTTTTCTTTTATCCTTTTA
AAAGCATTAATTACACTAAAAGTTTAGCCAAGCTTGAAGACTTTTATAAAAAGCTTTTTGAAGAAAAACAAATTCAAGTT
GTTATTATGTACAATGATTGTAGAAAAGTACATGAAATAGCCATTAATGTAGCTAAGCAAATGGGTATTGAAATATGGAT
TTTTGAAGAAGGTTATATAAGACCAAACTTCATTACTTTTGAAAAAGATGGAGTGAATGCAAACTCAACTCTACCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTCTCAAGTACTTTTAAAAATATG
GCCTTTGCTTCGTTTTTATACTGGCTTTTTGCTTTTTTATTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGCTTTGTTCAGTATATAGAAAAAACAAATACAAAATCACAGAAAAAAGTTTAAATG
AAAAAATTCTTTCCCTAAAACAAAAGTATTTTTTAGCTATTTTACAAGTGCATAATGATACTCAACTTTCTCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAAGTGATTATCTCTTTTGCTAATCATGCCAAAGCAAAGTCTTATCTAGTTTT
TAAGCACCATCCTATGGATCGTGGCTATAGGGACTATACTAAGCTTATAGAAGATTTGAGTTTAAAATATAATGTCGAGG
GTAGAATTTTATATGTACATGACTTACACTTACCTACACTCTTAATCAATGCAAGAGGCACTATAGTCATAAATAGCACA
GTAGGACTTTCTGCTTTATATCACAATAGTCCTTTAAAAGTTATGGGAAAAGCTTTTTATGATATTGAAGGTTTGACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGCAGAGCATATAAACCTGATGCGGTTTTACATGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGGAATTTTTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.626	100	0.633