Detailed information NTG0123216

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CSUB8521_RS01725
• Genome accession: NZ_CP007772
• Coordinates: 324885..326063 (+)
• Length: 392 a.a.
• NCBI ID: WP_039662845.1
• Uniprot ID: A0A0A8H8D4
• Organism: Campylobacter subantarcticus LMG 24374
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 319885..331063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSUB8521_RS01705 (CSUB8521_0347)	-	321004..321603 (+)	600	WP_039664757.1	gamma-glutamyl-CDP-amidate hydrolase	-
CSUB8521_RS01710 (CSUB8521_0348)	-	321600..322361 (+)	762	WP_039662839.1	phosphoramidate cytidylyltransferase	-
CSUB8521_RS01715 (CSUB8521_0349)	-	322358..322864 (+)	507	WP_039662840.1	adenylyl-sulfate kinase	-
CSUB8521_RS01720 (CSUB8521_0350)	-	322861..324888 (+)	2028	WP_039662843.1	capsular polysaccharide export protein	-
CSUB8521_RS01725 (CSUB8521_0351)	kpsS	324885..326063 (+)	1179	WP_039662845.1	capsular polysaccharide export protein	Regulator
CSUB8521_RS01730 (CSUB8521_0352)	-	326060..327568 (-)	1509	WP_039662846.1	SGNH/GDSL hydrolase family protein	-
CSUB8521_RS01735 (CSUB8521_0353)	-	327733..328863 (+)	1131	WP_082018416.1	DUF829 domain-containing protein	-
CSUB8521_RS01740 (CSUB8521_0354)	-	328872..330245 (+)	1374	WP_039662848.1	cytochrome P450	-
CSUB8521_RS01745 (CSUB8521_0355)	-	330242..330595 (+)	354	WP_039662850.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46358.90 Da
• Isoelectric Point: 10.1738

>NTDB_id=123216 CSUB8521_RS01725 WP_039662845.1 324885..326063(+) (kpsS) [Campylobacter subantarcticus LMG 24374]
MNLSKKLKKFSGKNVLLLQGPVGSFFRKIATRIPQAKVYKVNFNGGDFFFYPFNSINYTKSLAELEDFYKKLFEEKQIQV
VLMYNDCRKVHEIAISVAKQMGIEVWIFEEGYIRPNFITFEKGGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFKNM
AFASFLYWLFAFLFSWYFNNSLHHRSLKLFDFLPWLCSVYRKNKYKISEKKLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDVVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide

• Length: 1179 bp

>NTDB_id=123216 CSUB8521_RS01725 WP_039662845.1 324885..326063(+) (kpsS) [Campylobacter subantarcticus LMG 24374]
ATGAATTTAAGTAAGAAGTTAAAAAAATTTTCCGGTAAAAATGTTTTATTGCTTCAGGGTCCTGTAGGAAGTTTTTTCCG
TAAAATTGCTACAAGAATTCCACAAGCTAAAGTATACAAAGTAAATTTTAATGGCGGGGATTTTTTCTTTTATCCTTTTA
ATAGTATCAATTATACCAAAAGCTTAGCTGAGCTTGAAGACTTTTATAAAAAACTTTTTGAAGAAAAACAAATTCAAGTA
GTGCTGATGTACAATGACTGTAGAAAAGTACATGAAATCGCCATTAGTGTTGCTAAGCAAATGGGTATTGAAGTATGGAT
TTTTGAAGAAGGTTATATAAGACCAAACTTCATTACTTTTGAAAAAGGTGGAGTGAATGCAAACTCTACTTTACCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTCTCAAGTACTTTTAAAAATATG
GCCTTTGCTTCGTTTTTATACTGGCTTTTTGCTTTTTTATTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGCTTTGCTCAGTATATAGAAAAAACAAATACAAAATCAGCGAAAAAAAACTTAATG
AAAAAATTCTTTCCTTAAAACAAAAGTATTTTTTAGCTATTTTACAAGTGCACAATGATACTCAACTATCTCATCACTAT
AAAAAAACTACAGAAAAATTTATAGAAGAGGTGATTATCTCTTTTGCTAATCATGCTAAAGCAAAGTCTTATCTAGTTTT
TAAGCATCATCCTATGGACCGTGGCTATAGGGATTATACTAAGCTTATAGAAGATTTGAGTTTAAAATATAATGTCGAGG
GTAGAATTTTATATGTGCATGATTTGCATTTACCTACACTTTTGATCAATGCAAGAGGTACTATAGTTATAAATAGTACA
GTAGGACTTTCTGCCTTATATCACAATAGCCCTTTAAAGGTTATGGGAAAAGCCTTTTATGATATAGAAGGCCTAACGTA
TCAAAAAAGCTTACATACCTTTTGGAAAGAGTGTAGAGCCTATAAGCCTGATGTAGTTTTGCATGCTAAATTTAGAAACT
ACGTGATATATAAAACCCAAGTCAATGGAAATTTCTTCAAAAATACTAGCTTGGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

3D structure

• AlphaFold DB: A0A0A8H8D4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.772	100	0.622