Detailed information NTG0123080

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJM129_RS05990
• Genome accession: NZ_CP007749
• Coordinates: 1151491..1152450 (+)
• Length: 319 a.a.
• NCBI ID: WP_052796949.1
• Uniprot ID: A0A5T0KQU7
• Organism: Campylobacter jejuni subsp. jejuni M129
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1146491..1157450

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJM129_RS05965 (CJM129_5745)	neuC	1147082..1148206 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
CJM129_RS10150 (CJM129_9235)	-	1148199..1148816 (+)	618	WP_019260375.1	glycosyltransferase	-
CJM129_RS10155 (CJM129_9240)	-	1148813..1149145 (+)	333	WP_019260376.1	hypothetical protein	-
CJM129_RS05975 (CJM129_5750)	-	1149142..1149807 (+)	666	WP_032585167.1	cytidylyltransferase domain-containing protein	-
CJM129_RS05980	-	1149931..1150680 (+)	750	WP_002874235.1	CatB-related O-acetyltransferase	-
CJM129_RS05985 (CJM129_5755)	waaV	1150620..1151432 (-)	813	WP_002874234.1	glycosyltransferase family 2 protein	-
CJM129_RS05990 (CJM129_5760)	waaF	1151491..1152450 (+)	960	WP_052796949.1	lipopolysaccharide heptosyltransferase II	Regulator
CJM129_RS05995 (CJM129_5765)	gmhA	1152431..1152991 (-)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
CJM129_RS06000 (CJM129_5770)	rfaE1	1152988..1154373 (-)	1386	WP_002910336.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJM129_RS06005 (CJM129_5775)	rfaD	1154366..1155319 (-)	954	WP_002886910.1	ADP-glyceromanno-heptose 6-epimerase	-
CJM129_RS06010 (CJM129_5780)	gmhB	1155320..1155881 (-)	562	Protein_1170	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJM129_RS06015 (CJM129_5785)	-	1155962..1156264 (+)	303	WP_002852762.1	c-type cytochrome	-
CJM129_RS06020 (CJM129_5790)	ccoS	1156287..1156493 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36642.17 Da
• Isoelectric Point: 10.2870

>NTDB_id=123080 CJM129_RS05990 WP_052796949.1 1151491..1152450(+) (waaF) [Campylobacter jejuni subsp. jejuni M129]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKSEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=123080 CJM129_RS05990 WP_052796949.1 1151491..1152450(+) (waaF) [Campylobacter jejuni subsp. jejuni M129]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAATCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAACAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A5T0KQU7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.711	99.687	0.934