Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJM129_RS05650 | Genome accession | NZ_CP007749 |
| Coordinates | 1083007..1083309 (+) | Length | 100 a.a. |
| NCBI ID | WP_002875928.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni subsp. jejuni M129 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1078007..1088309
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJM129_RS05625 (CJM129_5400) | rpsR | 1078370..1078630 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJM129_RS05630 (CJM129_5405) | lon | 1078690..1081065 (-) | 2376 | WP_071306799.1 | endopeptidase La | - |
| CJM129_RS05635 (CJM129_5410) | - | 1081082..1081729 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| CJM129_RS05640 (CJM129_5415) | fliW | 1081890..1082279 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJM129_RS05645 (CJM129_5420) | proC | 1082279..1083010 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJM129_RS05650 (CJM129_5425) | ctsT | 1083007..1083309 (+) | 303 | WP_002875928.1 | hypothetical protein | Machinery gene |
| CJM129_RS05655 (CJM129_5430) | - | 1083306..1083968 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CJM129_RS05660 (CJM129_5435) | - | 1083965..1084417 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CJM129_RS05665 (CJM129_5440) | hemD | 1084414..1085043 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| CJM129_RS05670 (CJM129_5445) | thiE | 1085021..1085653 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| CJM129_RS05675 (CJM129_5450) | thiD | 1085643..1086455 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJM129_RS05680 (CJM129_5455) | - | 1086452..1087138 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| CJM129_RS05685 (CJM129_5460) | - | 1087135..1087896 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12161.32 Da Isoelectric Point: 9.0653
>NTDB_id=123078 CJM129_RS05650 WP_002875928.1 1083007..1083309(+) (ctsT) [Campylobacter jejuni subsp. jejuni M129]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=123078 CJM129_RS05650 WP_002875928.1 1083007..1083309(+) (ctsT) [Campylobacter jejuni subsp. jejuni M129]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |