Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   BMMGA3_RS04395 Genome accession   NZ_CP007739
Coordinates   882966..883916 (+) Length   316 a.a.
NCBI ID   WP_004433592.1    Uniprot ID   I3E7P2
Organism   Bacillus methanolicus MGA3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 877966..888916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMMGA3_RS04380 (BMMGA3_04465) - 880732..880914 (-) 183 WP_004433583.1 YjzD family protein -
  BMMGA3_RS04385 (BMMGA3_04470) - 881117..881854 (+) 738 WP_004433585.1 hypothetical protein -
  BMMGA3_RS04390 (BMMGA3_04475) - 881935..882798 (+) 864 WP_004433587.1 hypothetical protein -
  BMMGA3_RS04395 (BMMGA3_04480) med 882966..883916 (+) 951 WP_004433592.1 BMP family ABC transporter substrate-binding protein Regulator
  BMMGA3_RS04400 (BMMGA3_04485) - 883975..884277 (-) 303 WP_004433594.1 hypothetical protein -
  BMMGA3_RS04405 (BMMGA3_04490) - 884494..885426 (+) 933 WP_004433595.1 beta-ketoacyl-ACP synthase III -
  BMMGA3_RS04410 (BMMGA3_04495) fabF 885698..886939 (+) 1242 WP_004433597.1 beta-ketoacyl-ACP synthase II -
  BMMGA3_RS04415 (BMMGA3_04500) - 887135..887848 (+) 714 WP_237712819.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35448.34 Da        Isoelectric Point: 5.4697

>NTDB_id=122987 BMMGA3_RS04395 WP_004433592.1 882966..883916(+) (med) [Bacillus methanolicus MGA3]
MLKRFGVILLCLLVLAGCEQPTKTGKLKKVGLLVPDTVNDQVWGTKGYKGMLKIQSRFNVDVYIKEGMNSELRVERAVKE
FDQKGVNLIFGHGNEYAEYFNKISKNYPNIHFVSFNGDAKNKNTTSLNFQAYAMGFFGGMVASHMTKKNKVGIIAAYEWQ
PEVEGFYEGAKFENKQVDVNIQYVGQWDDDQTAMTILDNMIKAGVDVVYPAGDGYNVPVIEKAKEQGLFAIGYISDESDL
GKSTVLTSTIQHVDKLYELVAEQYNNGKLKSGNLHFDFKDGVISLGEFSPLIDDEFKAEINSYIEDYKKTGKLPNE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=122987 BMMGA3_RS04395 WP_004433592.1 882966..883916(+) (med) [Bacillus methanolicus MGA3]
ATGTTAAAACGTTTCGGAGTCATTCTTTTATGTCTTCTTGTATTGGCTGGATGTGAGCAGCCGACCAAAACTGGTAAATT
AAAAAAAGTAGGTTTGCTTGTGCCTGATACAGTAAACGACCAGGTTTGGGGAACAAAAGGATATAAAGGAATGCTGAAAA
TCCAATCTCGTTTTAACGTAGATGTTTATATTAAAGAAGGGATGAATTCTGAATTAAGAGTAGAACGAGCCGTAAAAGAA
TTTGACCAAAAAGGAGTCAATTTAATTTTCGGGCACGGGAATGAATACGCTGAGTATTTTAATAAAATTTCAAAAAATTA
TCCGAATATTCATTTCGTTAGTTTTAATGGCGACGCTAAAAATAAAAATACAACAAGTTTAAATTTCCAAGCCTATGCGA
TGGGTTTTTTTGGTGGGATGGTAGCTTCTCATATGACAAAAAAGAACAAGGTAGGAATCATTGCAGCTTATGAATGGCAG
CCTGAAGTTGAAGGTTTTTACGAAGGTGCGAAATTTGAAAATAAACAAGTGGACGTAAATATCCAATATGTTGGCCAATG
GGATGATGACCAGACAGCAATGACAATTTTAGACAATATGATTAAGGCTGGTGTGGATGTCGTTTATCCTGCCGGTGATG
GCTATAACGTTCCGGTTATTGAAAAAGCCAAAGAGCAGGGACTTTTTGCAATCGGCTATATATCTGATGAATCCGACCTT
GGCAAATCAACAGTTTTGACAAGTACAATTCAGCATGTTGATAAGCTTTACGAATTAGTAGCAGAACAATATAACAACGG
TAAACTCAAATCCGGAAATCTACATTTTGATTTTAAAGATGGAGTCATTTCTCTCGGGGAGTTCAGTCCACTGATAGATG
ATGAATTTAAAGCTGAAATAAATTCGTATATTGAAGATTATAAAAAAACCGGAAAACTTCCAAATGAGTAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I3E7P2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

54.777

99.367

0.544

Multiple sequence alignment