Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | BMMGA3_RS00560 | Genome accession | NZ_CP007739 |
| Coordinates | 105914..108358 (+) | Length | 814 a.a. |
| NCBI ID | WP_003348669.1 | Uniprot ID | I3E461 |
| Organism | Bacillus methanolicus MGA3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 100914..113358
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMMGA3_RS00545 (BMMGA3_00535) | - | 103788..104249 (+) | 462 | WP_412150597.1 | CtsR family transcriptional regulator | - |
| BMMGA3_RS00550 (BMMGA3_00540) | - | 104276..104824 (+) | 549 | WP_003348673.1 | UvrB/UvrC motif-containing protein | - |
| BMMGA3_RS00555 (BMMGA3_00545) | - | 104827..105891 (+) | 1065 | WP_003348671.1 | protein arginine kinase | - |
| BMMGA3_RS00560 (BMMGA3_00550) | clpC | 105914..108358 (+) | 2445 | WP_003348669.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| BMMGA3_RS00565 (BMMGA3_00555) | radA | 108496..109875 (+) | 1380 | WP_003348667.1 | DNA repair protein RadA | Machinery gene |
| BMMGA3_RS00570 (BMMGA3_00560) | disA | 109878..110951 (+) | 1074 | WP_003348665.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| BMMGA3_RS00575 (BMMGA3_00565) | - | 111172..112254 (+) | 1083 | WP_003348663.1 | PIN/TRAM domain-containing protein | - |
| BMMGA3_RS00580 (BMMGA3_00570) | ispD | 112321..113019 (+) | 699 | WP_003348661.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 814 a.a. Molecular weight: 90620.50 Da Isoelectric Point: 5.8441
>NTDB_id=122980 BMMGA3_RS00560 WP_003348669.1 105914..108358(+) (clpC) [Bacillus methanolicus MGA3]
MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALNALGLGSEKIQKEVENLIGTGKEVAQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGHQSGTAVSANT
PTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIMVDEPTPEESIQILKGLRDRYEAHHRVSITDEAIDAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSYTTPPNLKELEMKLEEVRKEKDAAVQSQEFEKAASLRDTEQRLREQLEETKKSWKEKQGQENSEVTVEDIASVV
SSWTGIPVSKLAETETEKLLKLEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALEKKHLR
EIVTLMANQLMKRLKEQDIHLELTDAAKEKIAEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGAVLTGQHVVIDVEDGE
FVVKTAEPTTTTNS
MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALNALGLGSEKIQKEVENLIGTGKEVAQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGHQSGTAVSANT
PTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIMVDEPTPEESIQILKGLRDRYEAHHRVSITDEAIDAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSYTTPPNLKELEMKLEEVRKEKDAAVQSQEFEKAASLRDTEQRLREQLEETKKSWKEKQGQENSEVTVEDIASVV
SSWTGIPVSKLAETETEKLLKLEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALEKKHLR
EIVTLMANQLMKRLKEQDIHLELTDAAKEKIAEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGAVLTGQHVVIDVEDGE
FVVKTAEPTTTTNS
Nucleotide
Download Length: 2445 bp
>NTDB_id=122980 BMMGA3_RS00560 WP_003348669.1 105914..108358(+) (clpC) [Bacillus methanolicus MGA3]
ATGATGTTTGGACGTTTTACAGAAAGAGCTCAGAAGGTTCTTGCATTAGCACAGGAAGAAGCCATCCGTTTAGGGCACAA
TAATATTGGCACAGAGCATATTTTGTTAGGTCTTGTCCGTGAAGGCGAAGGGATTGCTGCAAAAGCGCTGAACGCTCTTG
GTCTTGGTTCAGAAAAGATTCAAAAAGAGGTAGAAAACCTAATTGGAACAGGAAAAGAAGTGGCACAGACAATCCATTAC
ACTCCAAGAGCGAAAAAAGTGATTGAGCTTTCAATGGATGAAGCGCGTAAACTAGGTCATTCTTACGTTGGGACAGAACA
TATATTATTGGGGTTAATCCGTGAAGGCGAAGGAGTCGCAGCCCGTGTTTTAAATAATCTTGGCGTAAGCCTTAATAAGG
CCCGCCAGCAGGTTCTTCAATTATTGGGCAGCAATGAATCAGGAGGGCATCAAAGCGGTACGGCTGTCAGCGCCAATACG
CCTACATTAGACAGTCTCGCCCGGGATCTAACGGCAATTGCCCGTGAAGGAAGTTTGGATCCGGTCATTGGTCGAAGCAA
AGAGATTCAAAGGGTCATCGAAGTGTTAAGCCGCCGGACAAAAAACAACCCGGTATTAATAGGTGAACCAGGTGTCGGAA
AGACAGCGATTGCAGAAGGTCTTGCCCAGCAAATTGTCAATAATGAAGTTCCTGAAATTTTAAGGGACAAACGGGTTATG
ACCCTTGACATGGGTACAGTGGTAGCAGGAACAAAATACCGCGGCGAGTTTGAGGACCGTTTAAAGAAAGTAATGGATGA
AATCCGCCAGGCCGGCAATATTATTTTATTTATTGATGAGCTGCATACATTAATTGGTGCCGGCGGTGCAGAGGGCGCAA
TTGATGCCTCTAACATTTTGAAGCCTTCATTAGCCCGCGGGGAACTTCAATGTATTGGTGCAACAACGCTGGACGAGTAT
CGGAAGTACATTGAGAAAGATGCTGCTCTTGAGAGACGCTTCCAGCCGATTATGGTTGATGAACCTACGCCAGAAGAATC
CATTCAAATATTAAAGGGTCTCCGTGATCGGTATGAAGCACACCACCGTGTATCCATTACTGATGAAGCAATTGACGCTG
CCGTGAAACTGTCAGATCGGTATATTTCTGATCGTTTCTTGCCGGACAAAGCAATCGATCTAATTGATGAGGCAGGATCA
AAAGTAAGACTGCGTTCTTACACAACACCTCCGAATTTAAAAGAACTAGAAATGAAGCTTGAAGAAGTAAGAAAAGAAAA
AGATGCAGCGGTCCAAAGCCAGGAATTTGAAAAAGCTGCTTCATTAAGGGATACAGAACAACGTTTGCGTGAACAGCTCG
AAGAAACGAAGAAAAGCTGGAAAGAAAAGCAAGGACAGGAGAACAGCGAAGTAACGGTGGAAGATATCGCAAGTGTCGTA
TCAAGCTGGACTGGTATACCTGTTTCCAAGCTTGCAGAGACAGAAACAGAGAAACTTCTAAAACTTGAAGAAATCCTTCA
CTCACGAGTTATTGGCCAGGAAGAAGCTGTGAAGGCAATTTCTAAGGCTGTTCGACGTGCCCGCGCGGGGTTAAAGGATC
CAAAACGCCCAATTGGTTCATTTATTTTCCTTGGTCCCACTGGTGTCGGGAAAACAGAACTTGCCCGTGCTTTGGCTGAA
GCCATGTTCGGTGATGAAGATGCAATGATCCGAATCGATATGTCGGAGTATATGGAGAAACATTCAACTTCCCGTCTTGT
CGGTTCGCCGCCAGGGTATGTAGGTTATGAAGAAGGCGGTCAGCTAACAGAAAAAGTTCGAAGAAAACCATACTCTGTCA
TTCTTCTTGATGAAATTGAAAAAGCACATCCGGATGTCTTTAACATCTTACTGCAAGTGTTGGAAGACGGCCGTTTAACT
GATTCTAAAGGCCGGACAGTTGATTTTCGAAATACTGTGCTAATTATGACATCCAACGTAGGTGCGGAAGCGCTGAAGCG
CAATAAGTATGTAGGATTTAACATTCAAGATGGAGAACAGGACTACAAAGATATGAAAGGAAAAGTGATGGAAGAGCTGA
AAAAAGCGTTCCGTCCTGAATTCCTTAACCGTATCGATGAAATTATTGTGTTCCATGCTTTAGAGAAAAAGCATTTAAGA
GAAATTGTTACGTTAATGGCCAACCAATTAATGAAACGTTTGAAAGAACAAGATATTCACTTAGAATTAACAGATGCAGC
AAAAGAAAAAATTGCGGAAGAAGGATATGATCCGGAATATGGAGCACGCCCGTTGCGCAGGGCAATTCAAAAGCATATTG
AAGACCGATTATCCGAAGAACTGCTCAAAGGGGCAGTGTTAACCGGACAACATGTTGTAATCGACGTGGAAGATGGGGAG
TTTGTCGTTAAAACTGCAGAACCGACTACAACAACGAATTCATAA
ATGATGTTTGGACGTTTTACAGAAAGAGCTCAGAAGGTTCTTGCATTAGCACAGGAAGAAGCCATCCGTTTAGGGCACAA
TAATATTGGCACAGAGCATATTTTGTTAGGTCTTGTCCGTGAAGGCGAAGGGATTGCTGCAAAAGCGCTGAACGCTCTTG
GTCTTGGTTCAGAAAAGATTCAAAAAGAGGTAGAAAACCTAATTGGAACAGGAAAAGAAGTGGCACAGACAATCCATTAC
ACTCCAAGAGCGAAAAAAGTGATTGAGCTTTCAATGGATGAAGCGCGTAAACTAGGTCATTCTTACGTTGGGACAGAACA
TATATTATTGGGGTTAATCCGTGAAGGCGAAGGAGTCGCAGCCCGTGTTTTAAATAATCTTGGCGTAAGCCTTAATAAGG
CCCGCCAGCAGGTTCTTCAATTATTGGGCAGCAATGAATCAGGAGGGCATCAAAGCGGTACGGCTGTCAGCGCCAATACG
CCTACATTAGACAGTCTCGCCCGGGATCTAACGGCAATTGCCCGTGAAGGAAGTTTGGATCCGGTCATTGGTCGAAGCAA
AGAGATTCAAAGGGTCATCGAAGTGTTAAGCCGCCGGACAAAAAACAACCCGGTATTAATAGGTGAACCAGGTGTCGGAA
AGACAGCGATTGCAGAAGGTCTTGCCCAGCAAATTGTCAATAATGAAGTTCCTGAAATTTTAAGGGACAAACGGGTTATG
ACCCTTGACATGGGTACAGTGGTAGCAGGAACAAAATACCGCGGCGAGTTTGAGGACCGTTTAAAGAAAGTAATGGATGA
AATCCGCCAGGCCGGCAATATTATTTTATTTATTGATGAGCTGCATACATTAATTGGTGCCGGCGGTGCAGAGGGCGCAA
TTGATGCCTCTAACATTTTGAAGCCTTCATTAGCCCGCGGGGAACTTCAATGTATTGGTGCAACAACGCTGGACGAGTAT
CGGAAGTACATTGAGAAAGATGCTGCTCTTGAGAGACGCTTCCAGCCGATTATGGTTGATGAACCTACGCCAGAAGAATC
CATTCAAATATTAAAGGGTCTCCGTGATCGGTATGAAGCACACCACCGTGTATCCATTACTGATGAAGCAATTGACGCTG
CCGTGAAACTGTCAGATCGGTATATTTCTGATCGTTTCTTGCCGGACAAAGCAATCGATCTAATTGATGAGGCAGGATCA
AAAGTAAGACTGCGTTCTTACACAACACCTCCGAATTTAAAAGAACTAGAAATGAAGCTTGAAGAAGTAAGAAAAGAAAA
AGATGCAGCGGTCCAAAGCCAGGAATTTGAAAAAGCTGCTTCATTAAGGGATACAGAACAACGTTTGCGTGAACAGCTCG
AAGAAACGAAGAAAAGCTGGAAAGAAAAGCAAGGACAGGAGAACAGCGAAGTAACGGTGGAAGATATCGCAAGTGTCGTA
TCAAGCTGGACTGGTATACCTGTTTCCAAGCTTGCAGAGACAGAAACAGAGAAACTTCTAAAACTTGAAGAAATCCTTCA
CTCACGAGTTATTGGCCAGGAAGAAGCTGTGAAGGCAATTTCTAAGGCTGTTCGACGTGCCCGCGCGGGGTTAAAGGATC
CAAAACGCCCAATTGGTTCATTTATTTTCCTTGGTCCCACTGGTGTCGGGAAAACAGAACTTGCCCGTGCTTTGGCTGAA
GCCATGTTCGGTGATGAAGATGCAATGATCCGAATCGATATGTCGGAGTATATGGAGAAACATTCAACTTCCCGTCTTGT
CGGTTCGCCGCCAGGGTATGTAGGTTATGAAGAAGGCGGTCAGCTAACAGAAAAAGTTCGAAGAAAACCATACTCTGTCA
TTCTTCTTGATGAAATTGAAAAAGCACATCCGGATGTCTTTAACATCTTACTGCAAGTGTTGGAAGACGGCCGTTTAACT
GATTCTAAAGGCCGGACAGTTGATTTTCGAAATACTGTGCTAATTATGACATCCAACGTAGGTGCGGAAGCGCTGAAGCG
CAATAAGTATGTAGGATTTAACATTCAAGATGGAGAACAGGACTACAAAGATATGAAAGGAAAAGTGATGGAAGAGCTGA
AAAAAGCGTTCCGTCCTGAATTCCTTAACCGTATCGATGAAATTATTGTGTTCCATGCTTTAGAGAAAAAGCATTTAAGA
GAAATTGTTACGTTAATGGCCAACCAATTAATGAAACGTTTGAAAGAACAAGATATTCACTTAGAATTAACAGATGCAGC
AAAAGAAAAAATTGCGGAAGAAGGATATGATCCGGAATATGGAGCACGCCCGTTGCGCAGGGCAATTCAAAAGCATATTG
AAGACCGATTATCCGAAGAACTGCTCAAAGGGGCAGTGTTAACCGGACAACATGTTGTAATCGACGTGGAAGATGGGGAG
TTTGTCGTTAAAACTGCAGAACCGACTACAACAACGAATTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
89.259 |
99.509 |
0.888 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.623 |
98.526 |
0.499 |
| clpC | Streptococcus thermophilus LMD-9 |
46.917 |
100 |
0.477 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.303 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
46.354 |
99.386 |
0.461 |
| clpC | Streptococcus pneumoniae D39 |
46.354 |
99.386 |
0.461 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.23 |
99.386 |
0.459 |
| clpC | Streptococcus mutans UA159 |
45.036 |
100 |
0.457 |
| clpE | Streptococcus mutans UA159 |
56.41 |
76.658 |
0.432 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.276 |
78.01 |
0.431 |
| clpE | Streptococcus pneumoniae Rx1 |
54.874 |
78.133 |
0.429 |
| clpE | Streptococcus pneumoniae D39 |
54.874 |
78.133 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
54.874 |
78.133 |
0.429 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.752 |
80.344 |
0.424 |