Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NELON_RS07330 Genome accession   NZ_CP007726
Coordinates   1475477..1475926 (-) Length   149 a.a.
NCBI ID   WP_003771713.1    Uniprot ID   -
Organism   Neisseria elongata subsp. glycolytica ATCC 29315     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1470477..1480926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NELON_RS07305 (NELON_07695) - 1470968..1471288 (-) 321 WP_003771702.1 DUF485 domain-containing protein -
  NELON_RS07310 (NELON_07700) hslO 1471531..1472427 (-) 897 WP_003771705.1 Hsp33 family molecular chaperone HslO -
  NELON_RS11730 (NELON_07705) - 1472656..1472766 (-) 111 WP_040665779.1 methionine/alanine import family NSS transporter small subunit -
  NELON_RS07320 (NELON_07710) - 1472763..1474298 (-) 1536 WP_081456073.1 sodium-dependent transporter -
  NELON_RS07325 (NELON_07715) - 1474505..1475326 (-) 822 WP_003771712.1 symmetrical bis(5'-nucleosyl)-tetraphosphatase -
  NELON_RS07330 (NELON_07720) recX 1475477..1475926 (-) 450 WP_003771713.1 recombination regulator RecX Regulator
  NELON_RS07335 (NELON_07725) - 1476011..1476727 (-) 717 WP_040665780.1 phosphoglycolate phosphatase -
  NELON_RS07340 (NELON_07730) - 1476812..1477516 (-) 705 WP_003771717.1 5'-methylthioadenosine/adenosylhomocysteine nucleosidase -
  NELON_RS07345 (NELON_07735) - 1477536..1478015 (-) 480 WP_003771718.1 S-ribosylhomocysteine lyase -
  NELON_RS07350 (NELON_07740) cas2 1479046..1479339 (-) 294 WP_003771723.1 CRISPR-associated endonuclease Cas2 -
  NELON_RS07355 (NELON_07745) cas1c 1479414..1480427 (-) 1014 WP_041961436.1 type I-C CRISPR-associated endonuclease Cas1c -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17469.76 Da        Isoelectric Point: 9.8922

>NTDB_id=122913 NELON_RS07330 WP_003771713.1 1475477..1475926(-) (recX) [Neisseria elongata subsp. glycolytica ATCC 29315]
MNPQKTLRARALDILSRQEISRAELKRKLAPHAESEEEIERVLNEFADRRWQSDERYAEAYIHSKSRKHGSLRLKQALAQ
KGVDEETVRAFLPDRDKELASAVEVVRKKFKRPPADYAEKLKQMRFLAYRGFDGDTVQTALRQAWTEEE

Nucleotide


Download         Length: 450 bp        

>NTDB_id=122913 NELON_RS07330 WP_003771713.1 1475477..1475926(-) (recX) [Neisseria elongata subsp. glycolytica ATCC 29315]
ATGAACCCGCAGAAAACCCTCCGCGCACGCGCACTCGACATCCTTTCACGGCAGGAAATCAGCCGTGCCGAACTCAAGCG
CAAACTTGCCCCGCATGCCGAGAGCGAAGAGGAAATCGAGCGCGTACTGAACGAATTCGCCGACCGCCGCTGGCAGTCCG
ACGAACGCTATGCCGAAGCCTATATCCACAGCAAAAGCCGCAAACACGGCTCATTGCGGCTGAAACAGGCTTTGGCGCAA
AAGGGCGTGGACGAAGAAACCGTGCGCGCCTTCCTGCCCGACCGCGACAAGGAATTGGCTTCCGCCGTAGAAGTGGTGCG
CAAAAAATTCAAACGCCCGCCCGCCGACTATGCCGAAAAACTCAAACAGATGCGCTTTTTGGCCTATCGCGGCTTCGACG
GCGACACCGTTCAGACGGCCTTAAGGCAGGCCTGGACGGAAGAAGAATAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

74.324

99.329

0.738

Multiple sequence alignment