Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   EX97_RS10965 Genome accession   NZ_CP007690
Coordinates   2149620..2150336 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain UA-S391_USA300 isolate abscess/wound isolate     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2144620..2155336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EX97_RS10935 (EX97_10420) - 2144839..2145465 (+) 627 WP_000522384.1 nitroreductase family protein -
  EX97_RS10940 (EX97_10425) - 2145826..2146611 (+) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  EX97_RS15885 hld 2147208..2147288 (-) 81 WP_000046022.1 delta-hemolysin -
  EX97_RS10950 (EX97_10435) agrB 2147578..2148147 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  EX97_RS10955 (EX97_10440) agrD 2148144..2148284 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  EX97_RS10960 agrC 2148309..2149601 (+) 1293 WP_001549202.1 quorum-sensing sensor histidine kinase AgrC -
  EX97_RS10965 (EX97_10450) agrA 2149620..2150336 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  EX97_RS10970 - 2150408..2150515 (+) 108 WP_001790167.1 hypothetical protein -
  EX97_RS10975 (EX97_10455) - 2150703..2151662 (-) 960 WP_001253312.1 carbohydrate kinase family protein -
  EX97_RS10980 (EX97_10460) - 2151659..2153143 (-) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  EX97_RS10985 (EX97_10465) - 2153292..2154242 (-) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=122740 EX97_RS10965 WP_000688492.1 2149620..2150336(+) (agrA) [Staphylococcus aureus strain UA-S391_USA300 isolate abscess/wound isolate]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=122740 EX97_RS10965 WP_000688492.1 2149620..2150336(+) (agrA) [Staphylococcus aureus strain UA-S391_USA300 isolate abscess/wound isolate]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment