Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   B6116_RS09705 Genome accession   NZ_CP007667
Coordinates   1856972..1857433 (+) Length   153 a.a.
NCBI ID   WP_002216872.1    Uniprot ID   A0A2J1SH93
Organism   Neisseria meningitidis strain B6116/77     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1851972..1862433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B6116_RS09680 (B6116_01808) - 1853096..1853305 (-) 210 WP_002212949.1 tautomerase family protein -
  B6116_RS09685 (B6116_01809) - 1853650..1854456 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  B6116_RS09690 (B6116_01810) - 1854514..1855782 (-) 1269 WP_002216876.1 Glu/Leu/Phe/Val family dehydrogenase -
  B6116_RS09700 (B6116_01811) - 1856189..1856899 (+) 711 WP_002226230.1 phosphoglycolate phosphatase -
  B6116_RS09705 (B6116_01812) recX 1856972..1857433 (+) 462 WP_002216872.1 recombination regulator RecX Regulator
  B6116_RS14840 (B6116_01813) - 1857507..1857668 (+) 162 WP_002237185.1 hypothetical protein -
  B6116_RS09720 (B6116_01814) - 1857821..1858303 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  B6116_RS09725 (B6116_01815) - 1858664..1859911 (-) 1248 WP_002239875.1 M23 family metallopeptidase -
  B6116_RS09730 (B6116_01816) surE 1860167..1860913 (-) 747 WP_002220609.1 5'/3'-nucleotidase SurE -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.03 Da        Isoelectric Point: 10.0960

>NTDB_id=122213 B6116_RS09705 WP_002216872.1 1856972..1857433(+) (recX) [Neisseria meningitidis strain B6116/77]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=122213 B6116_RS09705 WP_002216872.1 1856972..1857433(+) (recX) [Neisseria meningitidis strain B6116/77]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2J1SH93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

98.039

100

0.98

Multiple sequence alignment