Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | EN18_RS13950 | Genome accession | NZ_CP007634 |
| Coordinates | 3014509..3015027 (+) | Length | 172 a.a. |
| NCBI ID | WP_001130227.1 | Uniprot ID | - |
| Organism | Vibrio cholerae strain 2012EL-2176 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3009509..3020027
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EN18_RS13940 (EN18_19775) | - | 3009919..3012774 (+) | 2856 | WP_001233047.1 | pitrilysin family protein | - |
| EN18_RS13945 (EN18_19780) | gshA | 3012886..3014460 (+) | 1575 | WP_000032608.1 | glutamate--cysteine ligase | - |
| EN18_RS13950 (EN18_19785) | luxS | 3014509..3015027 (+) | 519 | WP_001130227.1 | S-ribosylhomocysteine lyase | Regulator |
| EN18_RS13955 (EN18_19790) | - | 3015097..3016377 (-) | 1281 | WP_000340990.1 | HlyC/CorC family transporter | - |
| EN18_RS13960 (EN18_19795) | - | 3016460..3017254 (-) | 795 | WP_000369278.1 | inner membrane protein YpjD | - |
| EN18_RS13965 (EN18_19800) | ffh | 3017467..3018852 (+) | 1386 | WP_000462720.1 | signal recognition particle protein | - |
| EN18_RS13970 (EN18_19805) | rpsP | 3019088..3019336 (+) | 249 | WP_000256449.1 | 30S ribosomal protein S16 | - |
| EN18_RS13975 (EN18_19810) | rimM | 3019364..3019918 (+) | 555 | WP_000061906.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19080.90 Da Isoelectric Point: 5.2199
>NTDB_id=121971 EN18_RS13950 WP_001130227.1 3014509..3015027(+) (luxS) [Vibrio cholerae strain 2012EL-2176]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSERGIHTLEHLYAGFMRNHLNGSQVEIIDISP
MGCRTGFYMSLIGAPTEQQVAQAWLAAMQDVLKVESQEQIPELNEYQCGTAAMHSLEEAKAIAKNVIAAGISVNRNDELA
LPESMLNELKVH
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSERGIHTLEHLYAGFMRNHLNGSQVEIIDISP
MGCRTGFYMSLIGAPTEQQVAQAWLAAMQDVLKVESQEQIPELNEYQCGTAAMHSLEEAKAIAKNVIAAGISVNRNDELA
LPESMLNELKVH
Nucleotide
Download Length: 519 bp
>NTDB_id=121971 EN18_RS13950 WP_001130227.1 3014509..3015027(+) (luxS) [Vibrio cholerae strain 2012EL-2176]
ATGCCATTATTAGACAGTTTTACCGTCGATCATACTCGTATGAATGCACCGGCGGTGCGTGTTGCCAAAACCATGCAAAC
CCCAAAAGGGGATACGATTACCGTATTTGATTTGCGTTTTACTATGCCAAACAAAGATATCTTGTCTGAGCGCGGTATCC
ATACTCTAGAGCATCTCTACGCGGGCTTTATGCGCAATCACCTTAACGGCAGCCAAGTGGAGATCATCGATATTTCACCA
ATGGGTTGCCGTACAGGTTTCTACATGAGCTTGATTGGTGCGCCGACAGAACAGCAAGTGGCACAAGCATGGCTAGCCGC
AATGCAAGATGTGTTGAAAGTTGAAAGCCAAGAGCAAATTCCTGAGCTGAATGAGTACCAGTGCGGCACTGCGGCGATGC
ACTCGCTCGAAGAAGCCAAAGCGATTGCGAAAAACGTGATTGCGGCAGGCATCTCGGTTAACCGTAACGATGAGTTGGCG
CTGCCCGAATCTATGCTCAATGAGCTGAAGGTTCACTAA
ATGCCATTATTAGACAGTTTTACCGTCGATCATACTCGTATGAATGCACCGGCGGTGCGTGTTGCCAAAACCATGCAAAC
CCCAAAAGGGGATACGATTACCGTATTTGATTTGCGTTTTACTATGCCAAACAAAGATATCTTGTCTGAGCGCGGTATCC
ATACTCTAGAGCATCTCTACGCGGGCTTTATGCGCAATCACCTTAACGGCAGCCAAGTGGAGATCATCGATATTTCACCA
ATGGGTTGCCGTACAGGTTTCTACATGAGCTTGATTGGTGCGCCGACAGAACAGCAAGTGGCACAAGCATGGCTAGCCGC
AATGCAAGATGTGTTGAAAGTTGAAAGCCAAGAGCAAATTCCTGAGCTGAATGAGTACCAGTGCGGCACTGCGGCGATGC
ACTCGCTCGAAGAAGCCAAAGCGATTGCGAAAAACGTGATTGCGGCAGGCATCTCGGTTAACCGTAACGATGAGTTGGCG
CTGCCCGAATCTATGCTCAATGAGCTGAAGGTTCACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
100 |
100 |
1 |