Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MA06_RS20730 Genome accession   NZ_CP007626
Coordinates   3696555..3696728 (+) Length   57 a.a.
NCBI ID   WP_003195910.1    Uniprot ID   A0A1S9WYF1
Organism   Bacillus pseudomycoides strain 219298     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3691555..3701728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA06_RS20715 (DJ92_3787) - 3694146..3694328 (-) 183 WP_016113766.1 YjzD family protein -
  MA06_RS20720 (DJ92_3788) - 3694486..3695220 (+) 735 WP_018783038.1 hydrolase -
  MA06_RS20725 (DJ92_3789) - 3695278..3696138 (+) 861 WP_018783037.1 NAD(P)-dependent oxidoreductase -
  MA06_RS20730 (DJ92_3790) comZ 3696555..3696728 (+) 174 WP_003195910.1 ComZ family protein Regulator
  MA06_RS20735 (DJ92_3791) fabH 3697074..3698006 (+) 933 WP_018783036.1 beta-ketoacyl-ACP synthase III -
  MA06_RS20740 (DJ92_3792) fabF 3698038..3699276 (+) 1239 WP_018783035.1 beta-ketoacyl-ACP synthase II -
  MA06_RS20745 (DJ92_3793) - 3699691..3700479 (+) 789 WP_018783034.1 DUF2268 domain-containing putative Zn-dependent protease -
  MA06_RS20750 (DJ92_3794) - 3700651..3701397 (+) 747 WP_003206164.1 YjbA family protein -

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6416.61 Da        Isoelectric Point: 4.9502

>NTDB_id=121783 MA06_RS20730 WP_003195910.1 3696555..3696728(+) (comZ) [Bacillus pseudomycoides strain 219298]
MNEKNMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKAGK

Nucleotide


Download         Length: 174 bp        

>NTDB_id=121783 MA06_RS20730 WP_003195910.1 3696555..3696728(+) (comZ) [Bacillus pseudomycoides strain 219298]
ATGAATGAAAAAAATATGCAGTTTTTACAAATCGCTATGAAACACCTGCCGGAAGCAAAGGCCATTTTGGATGATAATGG
GATTGCACTTGATATGGAAAAAGCGCAGCCAGTACTAGAGTTGTTAATGAAAGTAATGAACGAAGCATATGAGCTTGGAA
AAGCGGGAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-55)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S9WYF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

59.259

94.737

0.561

Multiple sequence alignment