Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MA06_RS08710 | Genome accession | NZ_CP007626 |
| Coordinates | 1257284..1258327 (-) | Length | 347 a.a. |
| NCBI ID | WP_006096020.1 | Uniprot ID | - |
| Organism | Bacillus pseudomycoides strain 219298 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1252284..1263327
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MA06_RS08670 (DJ92_1336) | - | 1252698..1253330 (+) | 633 | WP_003200259.1 | VC0807 family protein | - |
| MA06_RS08675 (DJ92_1337) | - | 1253495..1253695 (-) | 201 | WP_016116311.1 | YqzE family protein | - |
| MA06_RS08680 (DJ92_1338) | - | 1253731..1254228 (-) | 498 | WP_003200427.1 | shikimate kinase | - |
| MA06_RS08685 (DJ92_1339) | comGG | 1254385..1254759 (-) | 375 | WP_018765812.1 | competence type IV pilus minor pilin ComGG | - |
| MA06_RS08690 (DJ92_1340) | comGF | 1254756..1255217 (-) | 462 | WP_040119622.1 | competence type IV pilus minor pilin ComGF | - |
| MA06_RS31875 | comGE | 1255204..1255521 (-) | 318 | WP_231398946.1 | competence type IV pilus minor pilin ComGE | - |
| MA06_RS08695 (DJ92_1341) | comGD | 1255502..1255945 (-) | 444 | Protein_1361 | competence type IV pilus minor pilin ComGD | - |
| MA06_RS08700 (DJ92_1342) | comGC | 1255942..1256244 (-) | 303 | WP_003200417.1 | competence type IV pilus major pilin ComGC | - |
| MA06_RS08705 (DJ92_1343) | comGB | 1256257..1257297 (-) | 1041 | WP_029427561.1 | competence type IV pilus assembly protein ComGB | - |
| MA06_RS08710 (DJ92_1344) | comGA | 1257284..1258327 (-) | 1044 | WP_006096020.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MA06_RS08715 (DJ92_1345) | - | 1258533..1259228 (+) | 696 | WP_003200412.1 | helix-turn-helix domain-containing protein | - |
| MA06_RS08720 (DJ92_1346) | - | 1259368..1259610 (+) | 243 | WP_006096019.1 | DUF2626 domain-containing protein | - |
| MA06_RS08725 (DJ92_1347) | - | 1259698..1261113 (+) | 1416 | WP_003200409.1 | L-cystine transporter | - |
| MA06_RS08730 (DJ92_1348) | - | 1261174..1261644 (-) | 471 | WP_033796417.1 | hypothetical protein | - |
| MA06_RS08735 (DJ92_1349) | - | 1261674..1262315 (-) | 642 | WP_040118985.1 | HD domain-containing protein | - |
| MA06_RS08740 (DJ92_1350) | - | 1262337..1263161 (-) | 825 | WP_040118986.1 | DUF4037 domain-containing protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38710.02 Da Isoelectric Point: 8.6412
>NTDB_id=121752 MA06_RS08710 WP_006096020.1 1257284..1258327(-) (comGA) [Bacillus pseudomycoides strain 219298]
MNGVEHFANTIMKEACALQASDLHIVPRQADAVIQLRIGKDLVTKHCIGKEFGERLVSHFKFLASMDIGERRKPQNGSLY
LQIEGQEVHLRLSTLPTVYLESLVIRLHLQASVQPLSHLSLFPSSAKTLLSFVHHSHGLLVFTGPTGSGKTTTMYALLEV
AKKGQTRRIVTLEDPIEKRKDGLLQIQINEKAGITYTTGLKAILRHDPDIILVGEIRDEETAKVAVRASLTGHLVMTTLH
TNDAKGAVLRLMDYGITRQEIEQSLLAVAAQRLVELKCPFCKGKCSPLCKAMRQVRQASVYELLYGHELKKAICEANGER
VTYHYETLQSCIRKGYALGFLEEDVYV
MNGVEHFANTIMKEACALQASDLHIVPRQADAVIQLRIGKDLVTKHCIGKEFGERLVSHFKFLASMDIGERRKPQNGSLY
LQIEGQEVHLRLSTLPTVYLESLVIRLHLQASVQPLSHLSLFPSSAKTLLSFVHHSHGLLVFTGPTGSGKTTTMYALLEV
AKKGQTRRIVTLEDPIEKRKDGLLQIQINEKAGITYTTGLKAILRHDPDIILVGEIRDEETAKVAVRASLTGHLVMTTLH
TNDAKGAVLRLMDYGITRQEIEQSLLAVAAQRLVELKCPFCKGKCSPLCKAMRQVRQASVYELLYGHELKKAICEANGER
VTYHYETLQSCIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=121752 MA06_RS08710 WP_006096020.1 1257284..1258327(-) (comGA) [Bacillus pseudomycoides strain 219298]
ATGAATGGTGTTGAACATTTTGCCAATACAATTATGAAGGAAGCATGTGCATTACAGGCATCCGATTTACATATCGTGCC
GCGACAAGCAGATGCAGTCATACAATTGCGCATTGGAAAAGATTTAGTAACGAAGCATTGTATTGGAAAGGAATTTGGAG
AAAGACTTGTTTCGCATTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGACGTAAGCCACAAAATGGATCATTGTAT
TTACAAATTGAGGGGCAAGAAGTGCACTTGCGTCTTTCTACACTACCAACTGTGTATTTAGAAAGCCTCGTCATTCGTTT
ACACTTGCAAGCGTCGGTTCAACCACTTTCCCATCTTTCTTTATTTCCAAGCTCGGCAAAAACACTTCTCTCTTTTGTAC
ATCATTCTCATGGATTACTCGTGTTTACTGGGCCGACAGGATCTGGGAAAACAACGACAATGTATGCTTTGTTAGAGGTA
GCCAAAAAGGGACAAACACGTCGTATTGTTACACTTGAGGATCCGATCGAAAAGAGAAAGGATGGCTTGTTACAAATTCA
GATTAATGAAAAAGCAGGTATCACGTACACAACTGGTTTAAAAGCGATTTTGCGCCATGATCCTGATATTATTTTAGTTG
GTGAAATTCGTGATGAAGAAACAGCAAAAGTAGCTGTGCGTGCGAGTTTAACAGGCCATTTAGTAATGACAACATTGCAT
ACAAACGATGCAAAAGGAGCTGTGTTACGTTTGATGGACTATGGGATTACGCGGCAAGAAATTGAGCAATCATTGCTTGC
TGTGGCAGCACAGCGTCTTGTTGAATTGAAGTGTCCATTTTGCAAAGGGAAATGTTCACCGTTATGTAAAGCAATGAGGC
AAGTGCGGCAAGCAAGCGTTTATGAGTTGTTATATGGCCATGAATTGAAAAAAGCTATTTGTGAAGCGAATGGAGAGCGT
GTAACCTATCATTATGAAACGTTGCAATCATGTATAAGAAAAGGATATGCCTTAGGCTTTTTAGAAGAGGATGTTTATGT
TTGA
ATGAATGGTGTTGAACATTTTGCCAATACAATTATGAAGGAAGCATGTGCATTACAGGCATCCGATTTACATATCGTGCC
GCGACAAGCAGATGCAGTCATACAATTGCGCATTGGAAAAGATTTAGTAACGAAGCATTGTATTGGAAAGGAATTTGGAG
AAAGACTTGTTTCGCATTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGACGTAAGCCACAAAATGGATCATTGTAT
TTACAAATTGAGGGGCAAGAAGTGCACTTGCGTCTTTCTACACTACCAACTGTGTATTTAGAAAGCCTCGTCATTCGTTT
ACACTTGCAAGCGTCGGTTCAACCACTTTCCCATCTTTCTTTATTTCCAAGCTCGGCAAAAACACTTCTCTCTTTTGTAC
ATCATTCTCATGGATTACTCGTGTTTACTGGGCCGACAGGATCTGGGAAAACAACGACAATGTATGCTTTGTTAGAGGTA
GCCAAAAAGGGACAAACACGTCGTATTGTTACACTTGAGGATCCGATCGAAAAGAGAAAGGATGGCTTGTTACAAATTCA
GATTAATGAAAAAGCAGGTATCACGTACACAACTGGTTTAAAAGCGATTTTGCGCCATGATCCTGATATTATTTTAGTTG
GTGAAATTCGTGATGAAGAAACAGCAAAAGTAGCTGTGCGTGCGAGTTTAACAGGCCATTTAGTAATGACAACATTGCAT
ACAAACGATGCAAAAGGAGCTGTGTTACGTTTGATGGACTATGGGATTACGCGGCAAGAAATTGAGCAATCATTGCTTGC
TGTGGCAGCACAGCGTCTTGTTGAATTGAAGTGTCCATTTTGCAAAGGGAAATGTTCACCGTTATGTAAAGCAATGAGGC
AAGTGCGGCAAGCAAGCGTTTATGAGTTGTTATATGGCCATGAATTGAAAAAAGCTATTTGTGAAGCGAATGGAGAGCGT
GTAACCTATCATTATGAAACGTTGCAATCATGTATAAGAAAAGGATATGCCTTAGGCTTTTTAGAAGAGGATGTTTATGT
TTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |