Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | DJ48_RS27960 | Genome accession | NZ_CP007618 |
| Coordinates | 5191938..5192981 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013201.1 | Uniprot ID | A0A6L8PIF1 |
| Organism | Bacillus anthracis strain 2000031021 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 5186938..5197981
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DJ48_RS27925 (DJ48_5477) | - | 5187194..5187682 (+) | 489 | WP_000764252.1 | hypothetical protein | - |
| DJ48_RS27930 (DJ48_5478) | - | 5187719..5188030 (-) | 312 | WP_001093243.1 | hypothetical protein | - |
| DJ48_RS27935 (DJ48_5479) | - | 5188282..5188497 (+) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| DJ48_RS27940 (DJ48_5480) | - | 5188585..5188992 (+) | 408 | WP_000877909.1 | hypothetical protein | - |
| DJ48_RS27945 (DJ48_5481) | - | 5189167..5190561 (-) | 1395 | WP_001094329.1 | L-cystine transporter | - |
| DJ48_RS27950 (DJ48_5482) | - | 5190669..5190911 (-) | 243 | WP_000440708.1 | DUF2626 domain-containing protein | - |
| DJ48_RS27955 (DJ48_5483) | - | 5191037..5191732 (-) | 696 | WP_000434120.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| DJ48_RS27960 (DJ48_5484) | comGA | 5191938..5192981 (+) | 1044 | WP_001013201.1 | competence protein ComGA | Machinery gene |
| DJ48_RS27965 (DJ48_5485) | comGB | 5192974..5194005 (+) | 1032 | WP_000471910.1 | comG operon protein ComGB | - |
| DJ48_RS27970 (DJ48_5486) | comGC | 5194017..5194316 (+) | 300 | WP_001178696.1 | comG operon protein ComGC | - |
| DJ48_RS27975 (DJ48_5487) | comGD | 5194313..5194768 (+) | 456 | WP_000810395.1 | comG operon protein ComGD | - |
| DJ48_RS27980 (DJ48_5488) | comGE | 5194761..5195063 (+) | 303 | WP_000829456.1 | competence type IV pilus minor pilin ComGE | - |
| DJ48_RS27985 (DJ48_5489) | comGF | 5195033..5195503 (+) | 471 | WP_000923094.1 | competence type IV pilus minor pilin ComGF | - |
| DJ48_RS27990 (DJ48_5490) | comGG | 5195500..5195871 (+) | 372 | WP_001231190.1 | competence type IV pilus minor pilin ComGG | - |
| DJ48_RS27995 (DJ48_5491) | - | 5196047..5196697 (+) | 651 | WP_000183878.1 | 2OG-Fe(II) oxygenase | - |
| DJ48_RS28000 (DJ48_5492) | aroK | 5196818..5197315 (+) | 498 | WP_000836640.1 | shikimate kinase AroK | - |
| DJ48_RS28005 (DJ48_5493) | - | 5197354..5197554 (+) | 201 | WP_000106085.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39354.93 Da Isoelectric Point: 9.3530
>NTDB_id=121717 DJ48_RS27960 WP_001013201.1 5191938..5192981(+) (comGA) [Bacillus anthracis strain 2000031021]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMGFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMGFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=121717 DJ48_RS27960 WP_001013201.1 5191938..5192981(+) (comGA) [Bacillus anthracis strain 2000031021]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGGTTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGGTTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |