Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   DF16_RS24025 Genome accession   NZ_CP007607
Coordinates   4603842..4604525 (-) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus thuringiensis serovar kurstaki str. YBT-1520     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4598842..4609525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DF16_RS24010 (DF16_orf04836) pepF 4599022..4600848 (-) 1827 WP_000003348.1 oligoendopeptidase F Regulator
  DF16_RS24015 (DF16_orf04837) - 4600900..4602144 (-) 1245 WP_000628331.1 competence protein CoiA family protein -
  DF16_RS24020 (DF16_orf04838) - 4602225..4603769 (-) 1545 WP_000799197.1 cardiolipin synthase -
  DF16_RS24025 (DF16_orf04839) mecA 4603842..4604525 (-) 684 WP_000350716.1 adaptor protein MecA Regulator
  DF16_RS24030 (DF16_orf04840) - 4604871..4605545 (+) 675 WP_000362615.1 TerC family protein -
  DF16_RS24035 (DF16_orf04841) spx 4605595..4605990 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  DF16_RS24045 (DF16_orf04842) - 4606584..4606787 (+) 204 WP_000559971.1 hypothetical protein -
  DF16_RS24050 (DF16_orf04843) - 4606818..4608464 (-) 1647 WP_000727248.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=121662 DF16_RS24025 WP_000350716.1 4603842..4604525(-) (mecA) [Bacillus thuringiensis serovar kurstaki str. YBT-1520]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=121662 DF16_RS24025 WP_000350716.1 4603842..4604525(-) (mecA) [Bacillus thuringiensis serovar kurstaki str. YBT-1520]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564

Multiple sequence alignment