Detailed information NTG0121623

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: EG64_RS07400
• Genome accession: NZ_CP007606
• Coordinates: 1522619..1524058 (-)
• Length: 479 a.a.
• NCBI ID: WP_038418267.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BM013B
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1517619..1529058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG64_RS07375 (EG64_07735)	recG	1518750..1520621 (-)	1872	WP_038418261.1	ATP-dependent DNA helicase RecG	-
EG64_RS07380 (EG64_07740)	-	1520703..1521050 (+)	348	WP_038418262.1	hypothetical protein	-
EG64_RS07385 (EG64_07745)	-	1521054..1521689 (+)	636	WP_038418264.1	outer membrane protein	-
EG64_RS07390 (EG64_07750)	-	1521686..1522438 (-)	753	WP_038418266.1	exodeoxyribonuclease III	-
EG64_RS07400 (EG64_07760)	comH	1522619..1524058 (-)	1440	WP_038418267.1	hypothetical protein	Machinery gene
EG64_RS07410 (EG64_07765)	dnaA	1524287..1525660 (-)	1374	WP_038418269.1	chromosomal replication initiator protein DnaA	-
EG64_RS07415 (EG64_07770)	-	1525814..1526356 (+)	543	WP_038418533.1	purine-nucleoside phosphorylase	-
EG64_RS07420 (EG64_07775)	-	1526399..1526638 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
EG64_RS07425 (EG64_07780)	glmS	1526639..1528432 (+)	1794	WP_038418270.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54773.56 Da
• Isoelectric Point: 6.4310

>NTDB_id=121623 EG64_RS07400 WP_038418267.1 1522619..1524058(-) (comH) [Helicobacter pylori strain BM013B]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPEPKLGSKNSKNSLLQPL
VTPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNADIDENNESNENRDNVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDRQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQAEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=121623 EG64_RS07400 WP_038418267.1 1522619..1524058(-) (comH) [Helicobacter pylori strain BM013B]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCACCACATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTG
ATGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCGATTAGAGATCCCAATGTTAAAGAATTTGCA
TGCGGGAAGTGGGTTTATGACGATGAAAACTTGCAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAGACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAAAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACGACC
AGGCAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAACGAATTG
AACTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTGAACGATATAATCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	95.825	100	0.958