Detailed information NTG0121580

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: EG63_RS07395
• Genome accession: NZ_CP007604
• Coordinates: 1522640..1524079 (-)
• Length: 479 a.a.
• NCBI ID: WP_038418267.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BM013A
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1517640..1529079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG63_RS07370 (EG63_07730)	recG	1518771..1520642 (-)	1872	WP_038418261.1	ATP-dependent DNA helicase RecG	-
EG63_RS07375 (EG63_07735)	-	1520724..1521071 (+)	348	WP_038418262.1	hypothetical protein	-
EG63_RS07380 (EG63_07740)	-	1521075..1521710 (+)	636	WP_038418264.1	outer membrane protein	-
EG63_RS07385 (EG63_07745)	-	1521707..1522459 (-)	753	WP_038418266.1	exodeoxyribonuclease III	-
EG63_RS07395 (EG63_07755)	comH	1522640..1524079 (-)	1440	WP_038418267.1	hypothetical protein	Machinery gene
EG63_RS07405 (EG63_07760)	dnaA	1524308..1525681 (-)	1374	WP_038418269.1	chromosomal replication initiator protein DnaA	-
EG63_RS07410 (EG63_07765)	-	1525835..1526377 (+)	543	WP_038418533.1	purine-nucleoside phosphorylase	-
EG63_RS07415 (EG63_07770)	-	1526420..1526659 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
EG63_RS07420 (EG63_07775)	glmS	1526660..1528453 (+)	1794	WP_038418270.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54773.56 Da
• Isoelectric Point: 6.4310

>NTDB_id=121580 EG63_RS07395 WP_038418267.1 1522640..1524079(-) (comH) [Helicobacter pylori strain BM013A]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPEPKLGSKNSKNSLLQPL
VTPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNADIDENNESNENRDNVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDRQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQAEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=121580 EG63_RS07395 WP_038418267.1 1522640..1524079(-) (comH) [Helicobacter pylori strain BM013A]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCACCACATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTG
ATGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCGATTAGAGATCCCAATGTTAAAGAATTTGCA
TGCGGGAAGTGGGTTTATGACGATGAAAACTTGCAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAGACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAAAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACGACC
AGGCAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAACGAATTG
AACTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTGAACGATATAATCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	95.825	100	0.958