Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | EG63_RS01670 | Genome accession | NZ_CP007604 |
| Coordinates | 335242..335646 (+) | Length | 134 a.a. |
| NCBI ID | WP_038417326.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain BM013A | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 330242..340646
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG63_RS01635 (EG63_01690) | - | 330420..331358 (-) | 939 | WP_038417322.1 | tetraacyldisaccharide 4'-kinase | - |
| EG63_RS01640 (EG63_01695) | - | 331355..332137 (-) | 783 | WP_038417323.1 | NAD+ synthase | - |
| EG63_RS01650 (EG63_01705) | ilvC | 332386..333378 (+) | 993 | WP_038417324.1 | ketol-acid reductoisomerase | - |
| EG63_RS01655 (EG63_01710) | minD | 333402..334208 (+) | 807 | WP_001019051.1 | septum site-determining protein MinD | - |
| EG63_RS01660 (EG63_01715) | minE | 334205..334438 (+) | 234 | WP_000051414.1 | cell division topological specificity factor MinE | - |
| EG63_RS01665 (EG63_01720) | dprA | 334445..335245 (+) | 801 | WP_038417325.1 | DNA-processing protein DprA | Machinery gene |
| EG63_RS01670 (EG63_01725) | dprB | 335242..335646 (+) | 405 | WP_038417326.1 | Holliday junction resolvase RuvX | Machinery gene |
| EG63_RS01675 (EG63_01735) | - | 335921..336781 (+) | 861 | WP_038417327.1 | cysteine-rich Sel1 repeat protein | - |
| EG63_RS01680 (EG63_01740) | - | 336895..337233 (+) | 339 | WP_038417328.1 | hypothetical protein | - |
| EG63_RS01685 (EG63_01745) | - | 337217..337777 (+) | 561 | WP_038417329.1 | hypothetical protein | - |
| EG63_RS01690 (EG63_01750) | - | 337834..338207 (+) | 374 | Protein_317 | glycoside hydrolase family protein | - |
| EG63_RS01695 (EG63_01755) | - | 338195..338461 (+) | 267 | Protein_318 | lysozyme | - |
| EG63_RS01705 (EG63_01770) | - | 338763..339149 (+) | 387 | WP_038417331.1 | DUF1294 domain-containing protein | - |
| EG63_RS07930 | - | 339331..340098 (+) | 768 | WP_080279610.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15218.65 Da Isoelectric Point: 8.7220
>NTDB_id=121569 EG63_RS01670 WP_038417326.1 335242..335646(+) (dprB) [Helicobacter pylori strain BM013A]
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYDNLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYDNLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=121569 EG63_RS01670 WP_038417326.1 335242..335646(+) (dprB) [Helicobacter pylori strain BM013A]
ATGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCACTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTCATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATCAATGAAGACAGATCTAGCATAGAAGCTTATGACAATTTAGAGCATTTGGGTAAGAAAAATAAGAGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
ATGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCACTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTCATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATCAATGAAGACAGATCTAGCATAGAAGCTTATGACAATTTAGAGCATTTGGGTAAGAAAAATAAGAGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
97.761 |
100 |
0.978 |