Detailed information NTG0121557

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: EG65_RS07470
• Genome accession: NZ_CP007603
• Coordinates: 1565219..1566658 (-)
• Length: 479 a.a.
• NCBI ID: WP_026938091.1
• Uniprot ID: -
• Organism: Helicobacter pylori J166
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1560219..1571658

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG65_RS07445 (EG65_07870)	recG	1561356..1563227 (-)	1872	WP_026938088.1	ATP-dependent DNA helicase RecG	-
EG65_RS07450 (EG65_07875)	-	1563304..1563651 (+)	348	WP_026938089.1	hypothetical protein	-
EG65_RS07455 (EG65_07880)	-	1563655..1564290 (+)	636	WP_026938090.1	outer membrane protein	-
EG65_RS07460 (EG65_07885)	-	1564287..1565039 (-)	753	WP_024751139.1	exodeoxyribonuclease III	-
EG65_RS07470 (EG65_07895)	comH	1565219..1566658 (-)	1440	WP_026938091.1	hypothetical protein	Machinery gene
EG65_RS07480 (EG65_07905)	dnaA	1566887..1568260 (-)	1374	WP_026938092.1	chromosomal replication initiator protein DnaA	-
EG65_RS07485 (EG65_07910)	-	1568413..1568955 (+)	543	WP_026938093.1	purine-nucleoside phosphorylase	-
EG65_RS07490 (EG65_07915)	-	1568998..1569237 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
EG65_RS07495 (EG65_07920)	glmS	1569238..1571031 (+)	1794	WP_026938094.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54789.66 Da
• Isoelectric Point: 6.7663

>NTDB_id=121557 EG65_RS07470 WP_026938091.1 1565219..1566658(-) (comH) [Helicobacter pylori J166]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
ATPSKISPTNEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNDTSNADINESNESNENRDNVEKQAVRDANVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTTTDITPCDYSTAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARVRKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=121557 EG65_RS07470 WP_026938091.1 1565219..1566658(-) (comH) [Helicobacter pylori J166]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCACATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATTGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACGCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAACTCCTAGCAAAATAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTTTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACGACACCTCTAACGCTGATATTA
ATGAAAGCAATGAAAGTAACGAAAATAGAGACAATGTGGAAAAACAAGCCGTTAGAGATGCTAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCTTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTACGACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACGGAAAAATGCAAAAGGGCTAGAGTGCGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCGTGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	94.99	100	0.95